Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq292 141 8e-29 seq326 131 2e-25 seq275 113 4e-20 >seq292 Length=16354 Score = 141 bits (156), Expect = 8e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || |||| ||| | |||||||| ||||| || |||||||| | ||| || | Sbjct 6406 CTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTACCA 6465 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | || || ||||| || || || ||||| ||||||||| Sbjct 6466 TCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTA 6525 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||||||| ||||| || | || || ||||| || ||||| | |||| Sbjct 6526 TCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAACTTCTAAGGTAATG 6585 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || |||| |||||| ||||||||||||||| Sbjct 6586 GTTTTACCTGTTAAAGTTTTAACAAAAATTTGCATC 6621 >seq326 Length=266662 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || || | ||| | |||||||| ||||| || || || || | |||| || Sbjct 239572 CTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTTCTACCG 239631 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || ||| | || || ||||| || || || ||||| ||||||||| Sbjct 239632 TCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCTTTA 239691 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| |||||| ||||| || | || | || |||||||| || ||||| | ||||| Sbjct 239692 TCTTGGATTTTTGATTTGA-CGTTATCAATAGTATCGGAAGATTCAACTTCTAAAGTAAT 239750 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| ||||| || ||||||||||| Sbjct 239751 AGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| | |||||||| ||||||||||| ||||| | |||| || Sbjct 240028 CTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGATAAGGTTCTACCG 240087 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | ||||| ||||| || || || ||||| ||||| || Sbjct 240088 TCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCCTTG 240147 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||||||| ||| | || | ||||| ||||| || ||||| | ||| | Sbjct 240148 TCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAACTTCTAAAGTGATA 240207 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | |||||| || ||||||||||| Sbjct 240208 GTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||||| |||||||| ||||| ||||| ||||| | |||| || ||| || ||||| Sbjct 239355 ATGCAATGTTGATTCTTTTTGAATATTGTAATCAGATAAGGTTCTACCATCTTCTAATTG 239414 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||| || ||| | || || ||||| ||||| || ||||| |||||||||||||| ||||| Sbjct 239415 TTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGGATTTT 239474 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | ||| | || | || || ||||| || ||||| | ||| | ||||| || || Sbjct 239475 TGATTTAACATTGTCAATAGTATCTGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGT 239534 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | ||| || ||||| |||||||| Sbjct 239535 CAAAGTCTTAACAAAGATTTGCAT 239558 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || || | ||| | |||||||| ||||| || || || || | || | | Sbjct 239800 CTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCA 239859 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || ||| | ||||| ||||| || || || ||||| |||||||| Sbjct 239860 TCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCTTTG 239919 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||| |||| | || | || | || | |||||| || || || ||||| | ||||| Sbjct 239920 TCTTGAA-TTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAACTTCTAAAGTAAT 239978 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | |||||| || ||||||||||| Sbjct 239979 GGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 >seq275 Length=119121 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| | |||||||| ||||| || || ||||| | ||| || | Sbjct 71151 CTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGATAAAGTTCTACCA 71210 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | || || ||||| || || || ||||| |||||||| Sbjct 71211 TCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTG 71270 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||||||| ||||| || | ||| || ||||| || ||||| | |||| Sbjct 71271 TCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAACTTCTAAGGTAATG 71330 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332 || || || |||| |||||| || ||| Sbjct 71331 GTCTTACCAGTTAAAGTTTTAACGAAA 71357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001143385440