Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq277 131 2e-25 >seq277 Length=184736 Score = 131 bits (144), Expect = 2e-25 Identities = 730/1157 (63%), Gaps = 36/1157 (3%) Strand=Plus/Minus Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121 ||||| | |||||| || | | |||||| || ||||| || || | || || ||||| Sbjct 160222 TCCCATAAATCAAATTGTAATAAACCTTGAGAAGCTGGAGAACCTTGGAAAGTTTCATAA 160163 Query 116122 GGGCCCTCAACCTCCGCCAATTC----GGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 116177 | || || | || ||||| | |||| || | || || ||||| || || Sbjct 160162 GCACCTTCTTTTTTAGCTAATTCAACAGAAGCT----TCAACAGCAGCATGATAAATGGT 160107 Query 116178 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA 116237 |||||||| || || | | | || || | | || ||||| | | ||| | Sbjct 160106 TTCAAAAATTTGAATGTTTAATTCTTTAGCTTTTTGTGATTCAAATGGTAAACGTAAAGC 160047 Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297 || || |||| || | |||||||||||| | ||||||| | || |||||| || || Sbjct 160046 CATGAAAGCATCAGCTAAACCTTGGACACCTAAAGCAATTGGTCTATTTCTCATGTTGGA 159987 Query 116298 CTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 116357 ||| || || || ||||| || || | ||| |||| || |||| ||| ||||| Sbjct 159986 TCTTCTTGCTTCTTCAACTGGATAGAAGTTACGATCAATAATTCTGTTTAAATTCTTGGT 159927 Query 116358 GACAACCTTTGTGATTTCATGAAGCTTTTC---GTAATCAAAAC------TGCGAGTCT- 116407 ||||| || | |||| ||| | | ||| || || || |||| |||| Sbjct 159926 AACAACTTTAGCAATTTTATGTAATTGTTCAAAGTTATAGAATTGAGTTTTGCG-GTCTG 159868 Query 116408 ------CTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCT 116461 ||||| ||| | || || | ||| ||||| || | ||||| |||| | Sbjct 159867 CTGAAACTTCAATGA-AGGCT--GGTAAGGCAATTGAAGCTAAGTTACAAACAGCAACTT 159811 Query 116462 CATCCTTATCA-GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCC 116520 |||| | | | | ||| || | |||||| ||||| || ||||| || ||| | ||| Sbjct 159810 CATC-TGGTGATGAGTATTCAACAATTTCAGTACATAAGTTTGATGATTTGATGATACCC 159752 Query 116521 AAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCC 116580 |||||||||||||| | || ||||||| ||||| ||||| ||||| ||||| || || Sbjct 159751 AAGTTCTTTTGATTAGTTTTCTTGTTACAAGCATCTTTGTAAAGCATGTATGGAGTACCA 159692 Query 116581 GTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTG 116640 || || ||||| | | | ||||| | ||||| | ||| ||||| | Sbjct 159691 GTTTCAGTTTGAGCTTCCAAGATAGCATACCATAATTTTTGAGCTTTAACAGTCTTTCTA 159632 Query 116641 GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCT 116700 | || || || | || || | || | | ||||| || ||||| || || Sbjct 159631 CCACGACCTTCTTTTTCATAACGTTCATATAATTCTTCAAATTCATCACCATAAGTTTCA 159572 Query 116701 GAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGC 116760 | ||||| || | || |||| |||| | | ||||| |||| ||||| | Sbjct 159571 TCTAAACCTGGAGCTTCATTTGGAGAGAATAATGTCCATTCACCATTGCTTTCAACTCTT 159512 Query 116761 TTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCA 116820 |||||||| | |||| |||||| | || | ||| | ||| ||| | |||||| Sbjct 159511 TTCATGAATAAATCTGAGATCCATAAAGCAGGGAATAAATCACGAGCTCTGATTTCTTCT 159452 Query 116821 TCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGG 116880 | || ||||| | | || | || || | |||||||||||||| ||||| | | Sbjct 159451 TTACCATGATTCTTTCTGATATCGATGAAATCAAAAATATCCGCGTGCCATGGTTCTAAG 159392 Query 116881 TACACCGCGATTG-ACC---CCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGC 116936 || | || | | ||| ||| | |||| | || | ||||| | || || Sbjct 159391 TATAAAGCAAAAGCACCTGGTCTTTTG-TTACCACCTTGATCAACATAACGAGCAGTGTT 159333 Query 116937 GTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACG 116996 ||| || || | || ||||||||||||||||| || ||||| || || ||| Sbjct 159332 GTTGAAGACTCTAACCATTGGAATGATACCATTTGAAGTACCATTAGTACCAGCAATGTA 159273 Query 116997 AGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 117056 ||| | | ||| | | || || || | ||||||||| || || ||| || || Sbjct 159272 AGAACCAGTAGATCTAATGTTATGAATATGTAAACCAATACCACCAGCAGTCTTAGAAAT 159213 Query 117057 TTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 117116 | || || | | | | | | || || ||||| || || ||| | | | || | Sbjct 159212 TAAGGCACATTGTTTTAAAGTTTCATAAATACCATCAATAGAATCATCTTGCATAGCAAC 159153 Query 117117 GAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 117176 | ||| || |||||||| || ||| ||||||||||| || | ||||| | || Sbjct 159152 TAAGAAACATGAAGACATTTGAGGATGTGGAGTACCAGCGTTAAATAAAGTTGGAGAAGC 159093 Query 117177 GTGGATGAACATACCTT 117193 || |||| ||| ||| Sbjct 159092 ATGTGTGAA-ATATCTT 159077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504408542240