Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq331 105 5e-18 seq326 102 6e-17 seq292 96.9 2e-15 seq275 96.9 2e-15 >seq331 Length=106725 Score = 105 bits (116), Expect = 5e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 42512 ATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGA 42571 ||||||||||||||||||| ||||| ||||||| || | || || ||| || Sbjct 102280 ATGTTACCTAAATCACCAACATGTCTAGTTTCATCAGATGGAGCACCATGAGTTTTTTGG 102221 Query 42572 AAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGT 42631 || |||||||||||| |||||| || ||||| ||||| ||| |||| ||||||||||| Sbjct 102220 AATGGATTAAAATGTGGACCAGCTGAAGTACAACCATTAGTGTTATCACCAAATTCATGG 102161 Query 42632 ATATGAAAACC 42642 ||||| || || Sbjct 102160 ATATGGAATCC 102150 >seq326 Length=266662 Score = 102 bits (112), Expect = 6e-17 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 39490 TCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCG 39549 || || |||| || | || ||||||||||| || ||||||||| ||||| ||||| Sbjct 239329 TCACCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCA 239388 Query 39550 GCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAG 39609 | || | |||| || |||||||| || | ||||||||||| || || || | Sbjct 239389 GATAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGT 239448 Query 39610 GGTACGCCTTCTTTGTCGCATATTTTTTGTTTA--ATCGTCGCTACTGTGTCTGCGCTTT 39667 || | |||||||| || |||||| |||| || ||| || || |||| || Sbjct 239449 GGAATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATA--GTATCTGAAGATT 239506 Query 39668 CCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || || ||||| || |||||||| || ||||| || || ||||| ||||| Sbjct 239507 CAACTTCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 |||||||| || || ||||||||| || || || || | ||| || |||| || Sbjct 239806 ACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCTTCT 239865 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 |||||||| || | ||||| ||||| || ||||| | || | ||||||||||| Sbjct 239866 AATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGA 239925 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 ||||| ||||| | | | ||||||| ||| || || |||||||| || ||| Sbjct 239926 ATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAACTTCTAAAGTAATGGTCTTA 239985 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || |||||||| ||||| || ||||| Sbjct 239986 CCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| ||| | | |||||||| || || ||||||||| || || || || | Sbjct 239560 CCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGAT 239619 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || | | || || |||||||| || | ||||||||||| || ||||| | || Sbjct 239620 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGA 239679 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||| || |||||| ||| | | | | || || | ||| || Sbjct 239680 ATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACT 239739 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || |||||||| |||||||| ||||| ||||| ||||| || ||||| Sbjct 239740 TCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 >seq292 Length=16354 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 || ||||| || || ||||||||| || |||||||| | ||| | |||| || Sbjct 6412 ACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTACCATCTTCT 6471 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 |||||||| || |||| |||||||| || ||||| | || | |||||||| || Sbjct 6472 AATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTATCTTGA 6531 Query 39631 ATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTT 39688 |||||| ||| | | ||| || || || | ||| || || || ||||| |||| Sbjct 6532 ATTTTTGATTTGACATTGTCAATA--GTATCAGAAGATTCAACTTCTAAGGTAATGGTTT 6589 Query 39689 TACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||| ||||||||||| || || || ||||| Sbjct 6590 TACCTGTTAAAGTTTTAACAAAAATTTGCAT 6620 >seq275 Length=119121 Score = 96.9 bits (106), Expect = 2e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || | || |||||||| ||||| ||||||||| || || ||||| | Sbjct 71139 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGAT 71198 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| | |||| || |||||||| || |||| |||||||| || ||||| | || Sbjct 71199 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 71258 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| |||||| ||| | | | | || || | ||| || Sbjct 71259 ATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAACT 71318 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAA 39710 || || ||||| || ||||| ||||||||||| ||||| Sbjct 71319 TCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347368058981612