Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq202 159 4e-34 >seq202 Length=29852 Score = 159 bits (176), Expect = 4e-34 Identities = 505/772 (65%), Gaps = 8/772 (1%) Strand=Plus/Plus Query 154358 AGTATTCAATAAGTATCATAGTGAAACTGACATGATGAGATATATCTACGAGTTATGCTC 154417 ||| |||||| ||||| ||||||| ||| | |||||| | || | ||| Sbjct 16282 AGTTTTCAATTTACATCATTCAGAAACTGCAATGTTAAGATATTTACACAATTTACATAA 16341 Query 154418 TAAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAA 154477 ||||||| | ||||||| ||| ||| | ||| | || || || ||||||||||| Sbjct 16342 TAAAGATATTTCATTAGCTAATACAATGATACCATTAGGTTCATGTACTATGAAATTAAA 16401 Query 154478 TGCAGCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATAC 154537 || | | ||| | | || | |||||| ||| |||| | | |||||| | Sbjct 16402 TGGTACTGTGGAAATGTTACCATTATCATGGCCAGAATTTGGTTCAATTCATCCATTTGT 16461 Query 154538 ACCTATGATACAGACCATGGGTTATCAGAAAATTATAGATGACTTACAGAAATGGTTATG 154597 || | | || |||||| | || | || |||| ||| | ||| ||| Sbjct 16462 TCCAAAAAATCAAGTTGAAGGTTATAAAGAATTAATTGATGTCTTGGAAAAAGATTTAGC 16521 Query 154598 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 154657 | |||| || |||||| | | | | |||||||| || |||| |||| ||||| | Sbjct 16522 TAATATTACTGGGTTTAGTGCAACTACTTTACAACCAAATTCAGGTGCACAAGGTGAATT 16581 Query 154658 TGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGT 154717 | |||| | || || || ||| ||| || | || ||| ||| | ||| | Sbjct 16582 TTCAGGTTTAAGAGTTATTAAACAATATCATGAATCAAATGGTGATTTTAATCGTAATAT 16641 Query 154718 ATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGAT 154777 ||||| || |||| || || ||||| || |||||||| ||| | ||| || | Sbjct 16642 TTGTTTAATTCCAGTTTCTGCTCATGGTACAAATCCTGCATCTGCAGCTATGTCAAATTT 16701 Query 154778 GAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAA 154837 |||||| | | | ||| || ||||| |||| | ||||| | || || Sbjct 16702 TAAAGTTATTCCAATTGAATGTTTAGAAAATGGTTCATTAGATCTTGAAGATGTTGAAAA 16761 Query 154838 GAAAGC-AATCATGAATACATTTGAACTGTCATG-TATTATGATTACATACCCATCTACA 154895 || | || || | || | | |||| || ||| ||||||||||| || || || Sbjct 16762 AAAGGTTAAACAATA-TAAAGAT-AACTTAGGTGCTATAATGATTACATATCCTTCAACT 16819 Query 154896 CATGGTGTATTTGAAACTAACA-TTAGACA-GATATGTAAGATCGTTCATGACAATGGTG 154953 ||||| |||||||| | |||| ||| || | ||| || | |||||||| ||||||| Sbjct 16820 TATGGTTTATTTGAACC-AACAGTTAAACGTGCTATTGAAT-TGGTTCATGAAAATGGTG 16877 Query 154954 GTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTG 155013 |||| || ||| | ||||| |||||| | |||||||| || || || | |||| ||| Sbjct 16878 GTCAAGTTTATTTAGATGGTGCAAATATGAATGCACAAGTTGGTTTAACTTCACCAGGTG 16937 Query 155014 AGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAG 155073 | | ||||| ||||| |||||| | || ||||| || ||||| ||||||||||| | Sbjct 16938 ATTTAGGTGCTGATGTTTGTCATTTGAATTTACACAAGACATTTGCAATTCCACATGGTG 16997 Query 155074 GTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCTCACACCATT 155125 |||| ||||| || || ||||| || |||| || | ||| | | ||||| Sbjct 16998 GTGGTGGTCCAGGTGTTGGTCCAATTTGTGTTGCTGAGCATTTAATTCCATT 17049 Score = 132 bits (146), Expect = 6e-26 Identities = 192/271 (71%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 153746 TGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCA 153805 ||||||||| ||||| ||||| |||||| |||| ||||| | ||| |||||||| Sbjct 15646 TGATATTGCATTAGGTTCATCTCAAAGATTTGGTGTTCCAATGGGTTTTGGTGGTCCTCA 15705 Query 153806 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 153865 |||||| || ||| || | || || | || ||||| || ||||| |||||||| || Sbjct 15706 TGCTGCTTTTTTTTCAGTTATTGAAAAATTAAATAGAAAAATTCCTGGTAGAATTGTTGG 15765 Query 153866 TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 153925 | || |||||| ||| ||| |||| |||||||| |||| |||||||| || Sbjct 15766 TGTTTCTAAAGATAGATTAGGAAATCAAGCTCTTAGATTAGCTTTACAAACTAGAGAACA 15825 Query 153926 GCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAA 153985 ||||| | |||||| || ||||| || || || || ||||| || | | ||||| Sbjct 15826 ACATATTAAGAGAGATAAGGCAACTTCAAATATTTGTACTGCTCAAGCTTTATTAGCTAA 15885 Query 153986 TATGTCTGGATTCTATGCAGCATATCATGGT 154016 ||| | | ||||||| ||||||||| Sbjct 15886 TATTGCATCAAATTATGCAGTTTATCATGGT 15916 Score = 114 bits (126), Expect = 1e-20 Identities = 238/345 (69%), Gaps = 11/345 (3%) Strand=Plus/Plus Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264 |||| ||| |||| || ||| || || || || ||||| || || |||| | |||| Sbjct 15081 TTATTGGTAAAGGTTATTATAATACTATAACTCCACCAGTTATTAAGAGAAATAT-CTTG 15139 Query 153265 AGAATC-CTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAG 153322 ||||| | || ||||| || ||||| || || |||||| | || | || || || | Sbjct 15140 -GAATCACCAGAATGGTATACTTCTTATACCCCATATCAACCAGAAGTTTCACAAGGTCG 15198 Query 153323 ATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGC 153382 || ||| | ||||| |||| |||||| | ||| |||| | || |||||||| | | Sbjct 15199 TTTAGAATCATTATTGAATTTCCAAACTGTTATCTCAGATTTAACTGGATTACCTGTTTC 15258 Query 153383 AAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAAT-GCTATTAGCATATA 153441 ||| || ||| |||||||||||| |||||||| || |||||| | |||| | |||| Sbjct 15259 AAATGCTTCTTTATTAGATGAAGGTACTGCAGCTGCTGAAGCATTAAGTATT-TCTTATA 15317 Query 153442 ATTCTACAAGAGATAAGA----AGACTGTCATAGTTGATAAAGATATATTCCCACAGACT 153497 || | ||||| | || | | | | | | ||||||| ||||| ||||| ||| Sbjct 15318 ATAATGCAAGAAAGAAAAAATCAAAATAT-GTTGTTGATACTGATATTCATCCACAAACT 15376 Query 153498 CTAGCAGTTCTAGAGACCAGAGCAAAACCATTGGGCATTGAGATT 153542 || ||||| | | || ||||| | ||||| ||||| ||| Sbjct 15377 TTATCAGTTTTGAAAACAAGAGCTTATCCATTAAATATTGAAATT 15421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210164581760