Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq275 179 8e-40 seq292 152 1e-31 seq326 149 1e-30 >seq275 Length=119121 Score = 179 bits (198), Expect = 8e-40 Identities = 197/257 (77%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | || | ||| || ||||||||||| |||||||| | | ||| Sbjct 71144 TCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGATAAAGT 71203 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || ||||| | |||||||| || || ||||| || Sbjct 71204 TCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACC 71263 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||||||| ||||| || |||||||| || ||| ||| ||||| | Sbjct 71264 TTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAACTTCTAA 71323 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT-TATGGTTACTT-GGTG 195156 ||||| ||||| || || |||||||| ||||| ||| ||| ||| |||| || | Sbjct 71324 GGTAATGGTCTTACCAGTTAAAGTTTTAACGAA-ACTATAATTATAT-GTTAGTTCTTTT 71381 Query 195157 GTTCTTTTTAAATATTT 195173 ||||||| | |||||| Sbjct 71382 GTTCTTTAGATATATTT 71398 >seq292 Length=16354 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || ||||||||||| || ||||| | | |||||| |||||||| | || ||||| Sbjct 6424 GTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTACCATCTTCTAATTGTTTACCA 6483 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || ||||| | |||||||| || || ||||| |||||||| |||||||||||| ||| Sbjct 6484 GCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTTGATTTG 6543 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || ||||| || || ||| ||| ||||| | ||||| || || ||||| |||||| Sbjct 6544 ACATTGTCAATAGTATCAGAAGATTCAACTTCTAAGGTAATGGTTTTACCTGTTAAAGTT 6603 Query 195124 TTTACGAACACTTGCAT 195140 || || || | |||||| Sbjct 6604 TTAACAAAAATTTGCAT 6620 >seq326 Length=266662 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| ||||| | || | || || ||||||||||| ||||| || | | || Sbjct 239565 TCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGT 239624 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | || ||||| ||||| || | |||||||| ||||| ||||| || Sbjct 239625 TCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGAATACC 239684 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||| |||||| |||||||| ||||| || || ||| ||| ||||| | Sbjct 239685 TTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACTTCTAA 239744 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || || ||||| || ||||| ||||| | |||||| Sbjct 239745 AGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || ||||||||||| ||||| || | | ||| | |||||||| | || ||||| Sbjct 239818 GTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCTTCTAATTGTTTACCA 239877 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 ||||| || | |||||||| || || ||||| |||||||||||||||||||| || Sbjct 239878 GCGAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGAATTTTGGATTTA 239937 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||||| || |||||||| || ||| ||||| | |||| ||||| || ||||||||| Sbjct 239938 ACGTTATCGATGGTGTCTGATGATTCAACTTCTAAAGTAATGGTCTTACCAGTCAAAGTT 239997 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | |||||| Sbjct 239998 TTAACGAAAATTTGCAT 240014 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | || || |||||||| ||||||||||| | | || Sbjct 240021 TCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGATAAGGT 240080 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | || ||||| || || || | |||||||| || || ||||| || Sbjct 240081 TCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGAATACC 240140 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||||||| || || || ||||| ||||| ||| ||| ||||| | Sbjct 240141 TTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAACTTCTAA 240200 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || ||||||||||| ||||| | |||||| Sbjct 240201 AGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || |||||||||||||||||||| | | ||||| |||||||| | || ||||| Sbjct 239362 GTTGATTCTTTTTGAATATTGTAATCAGATAAGGTTCTACCATCTTCTAATTGTTTACCA 239421 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 ||||| || | ||||||||||| || ||||| |||||||| ||||| |||||| || Sbjct 239422 GCGAAAATTAAACGTTGTTGGTCAGGTGGAATACCTTCTTTATCTTGGATTTTTGATTTA 239481 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || ||||| || || ||| ||| ||||| | || | || || || |||||||| Sbjct 239482 ACATTGTCAATAGTATCTGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGTCAAAGTC 239541 Query 195124 TTTACGAACACTTGCAT 195140 || || || | |||||| Sbjct 239542 TTAACAAAGATTTGCAT 239558 Score = 102 bits (112), Expect = 2e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || ||||||||||| ||||| || | | ||| | |||||||| | || ||||| Sbjct 240274 GTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCTTCTAATTGTTTACCA 240333 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || || || | |||||||| ||||| || || |||||||| |||||||| || ||| Sbjct 240334 GCAAAAATCAAACGTTGTTGATCTGGTGGGATCCCTTCTTTATCTTGAATCTTGGATTTG 240393 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCAC 195092 ||||| ||||| ||||| ||| ||| || Sbjct 240394 ACGTTATCAATAGTGTCAGAAGATTCAAC 240422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109476425655188