Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq292 188 6e-43 seq326 170 2e-37 seq275 163 2e-35 >seq292 Length=16354 Score = 188 bits (208), Expect = 6e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||| |||||||| | || ||||||||||| || || ||||| | Sbjct 6394 CCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGAT 6453 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| || ||||| ||||| ||||| || ||||| |||||||| || ||| Sbjct 6454 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 6513 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||||||||||||||||||| ||| ||| | || | ||| ||||| | ||| ||| Sbjct 6514 ATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAACT 6573 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | ||||| || ||||||||||| ||||| || ||||| Sbjct 6574 TCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCAT 6620 >seq326 Length=266662 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || ||||| | || ||||||||||| ||||||||||| | Sbjct 240016 CCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGAT 240075 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || ||||| ||||| ||||| |||||||| |||||||| || ||| Sbjct 240076 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGA 240135 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||||||| ||| ||| | || | |||||| || | ||| ||| Sbjct 240136 ATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAACT 240195 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| ||||| || || |||||||| || || || ||||| Sbjct 240196 TCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 161 bits (178), Expect = 8e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | | || ||||| | || ||||||||||| ||||||||||| | Sbjct 239332 CCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGAT 239391 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| || ||||| ||||| || || || ||||| ||||| || || ||| Sbjct 239392 AAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGA 239451 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||||||||| |||||| ||| ||| | || | ||| || || | ||| ||| Sbjct 239452 ATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAACT 239511 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||||| ||||| || || ||||| || ||||| || ||||| Sbjct 239512 TCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | |||||| ||||| | || ||||||||||| || ||||| || | Sbjct 239560 CCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGAT 239619 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || ||||| ||||| || || || ||||| |||||||| || ||| Sbjct 239620 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGA 239679 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||||||||| |||||| ||| || | || | ||| || || | ||| ||| Sbjct 239680 ATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACT 239739 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | ||||| || ||||| ||||| || || || ||||| Sbjct 239740 TCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||| || ||||| | || ||||||||||| || ||||| || | Sbjct 239788 CCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGAT 239847 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || ||||| ||||| || || |||||||| |||||||| || ||| Sbjct 239848 AAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGGA 239907 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||||||||| ||| || | || | ||||| || | ||| ||| Sbjct 239908 ATACCTTCTTTGTCTTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAACT 239967 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | || || || || |||||||| || || || ||||| Sbjct 239968 TCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 129 bits (142), Expect = 5e-25 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||| || ||||| | || ||||||||||| || ||||| || | Sbjct 240244 CCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGAT 240303 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || ||||| ||||| ||||| |||||||| |||||||| || || Sbjct 240304 AAAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGG 240363 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 || ||||||||||||||||| || ||| || | || | ||||||||| | ||| || Sbjct 240364 ATCCCTTCTTTATCTTGAATCTTGGATTTGACGTTATCAATAGTGTCAGAAGATTCAAC 240422 >seq275 Length=119121 Score = 163 bits (180), Expect = 2e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||||| ||||| | || ||||||||||| || |||||||| | Sbjct 71139 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGAT 71198 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| || ||||| ||||| ||||| || ||||| |||||||| || ||| Sbjct 71199 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 71258 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||||||| ||| ||| | || | || ||||| | ||| ||| Sbjct 71259 ATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAACT 71318 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || | || | || || || ||||||||||| || || Sbjct 71319 TCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276642009948