Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq326 205 2e-47 seq292 196 9e-45 seq275 159 6e-34 seq280 109 1e-18 >seq326 Length=266662 Score = 205 bits (226), Expect = 2e-47 Identities = 182/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||||||||| |||| ||| |||| ||||||||| | ||||| |||||| || || || Sbjct 239331 ACCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGA 239390 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 ||| |||||| ||| ||||||||||| || || |||||||| | ||||| ||||| || Sbjct 239391 TAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGG 239450 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||||||||| ||||| | ||| | ||| ||||||||| ||||| ||||| Sbjct 239451 AATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAAC 239510 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||| ||||||||||| || | || || ||||| |||||||| Sbjct 239511 TTCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 205 bits (226), Expect = 2e-47 Identities = 187/236 (79%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||||||||| | |||| ||| ||||| | ||||| ||| || Sbjct 239551 ATTTGCATACCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTG 239610 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| ||||| |||||| || ||||||||||| || || |||||||| | |||||| Sbjct 239611 TAGTCTGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGA 239670 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || |||||||||||||| ||||| | ||| | || ||||||||||||| Sbjct 239671 TCTGGTGGAATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAA 239730 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||||| ||| |||||||||||||||| ||||| || || |||||||| Sbjct 239731 GATTCAACTTCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 185 bits (204), Expect = 2e-41 Identities = 183/237 (77%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||||||||||| | |||| ||| ||||| | ||||| ||||| Sbjct 240006 AATTTGCATACCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATT 240065 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || ||||| |||||| || ||||||||||| || |||||||| || | ||||| Sbjct 240066 GTAATCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTG 240125 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || || ||||| || ||||| ||||| | ||| | ||| |||||| || || Sbjct 240126 ATCAGGTGGAATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGA 240185 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| |||||||||| ||| ||||||||||| || | ||||| || || |||||||| Sbjct 240186 AGATTCAACTTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 158 bits (174), Expect = 2e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| |||| | |||| ||| ||||| | ||||| ||| || Sbjct 239778 AATTTGCATACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTT 239837 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| ||||| || | | ||| ||||||||||| || || ||||| || | ||||| Sbjct 239838 GTAGTCTGATAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTG 239897 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || || |||||||| ||||| ||||||| ||| | || || || || || Sbjct 239898 ATCAGGTGGAATACCTTCTTTGTCTTGAATTTTGGATTTAACGTTATCGATGGTGTCTGA 239957 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||||| ||| || || ||||| || | ||||| || || |||||||| Sbjct 239958 TGATTCAACTTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 134 bits (148), Expect = 2e-26 Identities = 143/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| |||| | |||| ||| ||||| | ||||| ||| || Sbjct 240234 AATTTGCATACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTT 240293 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| ||||| || | | ||| ||||||||||| || |||||||| || | ||||| Sbjct 240294 GTAGTCTGATAAAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTG 240353 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || |||||||||||||| || |||| ||| | || |||||| || || Sbjct 240354 ATCTGGTGGGATCCCTTCTTTATCTTGAATCTTGGATTTGACGTTATCAATAGTGTCAGA 240413 Query 193304 AGACTCAAC 193312 ||| ||||| Sbjct 240414 AGATTCAAC 240422 >seq292 Length=16354 Score = 196 bits (216), Expect = 9e-45 Identities = 182/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||||||||| |||| | || | ||| ||||| | ||||| ||| ||||| || || Sbjct 6393 ACCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGA 6452 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 ||| |||||| ||| ||||||||||| || ||||| ||||| | ||||||||||| || Sbjct 6453 TAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGG 6512 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||||||||| ||||| | ||| | ||| ||||||||| ||||| ||||| Sbjct 6513 AATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAAC 6572 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| || || ||||||||||||| ||||| ||||| |||||||| || Sbjct 6573 TTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCATCTT 6623 >seq275 Length=119121 Score = 159 bits (176), Expect = 6e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| |||| | |||| ||| || || | ||||| ||| || || || Sbjct 71136 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCA 71195 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| |||||| ||| ||||||||||| || ||||| ||||| | ||||||||||| Sbjct 71196 GATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGT 71255 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| ||||| | ||| | ||| ||| ||||| ||||| ||| Sbjct 71256 GGAATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCA 71315 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 ||||||| || || || ||||| |||| ||||| || || Sbjct 71316 ACTTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 >seq280 Length=108631 Score = 109 bits (120), Expect = 1e-18 Identities = 204/292 (70%), Gaps = 12/292 (4%) Strand=Plus/Plus Query 159886 TATCCGATGAAGTAATTCATCTATTATTTTCTGCAAATAGATGGGAAAAATATAATGAAA 159945 |||| |||||| | |||| |||||||||||||||||||||||||| | ||||| | Sbjct 34997 TATCAGATGAATCAGCTCATTTATTATTTTCTGCAAATAGATGGGAATTAGCTAATGTTA 35056 Query 159946 T-AATTAAAACGTTAGAAATGGGTATTACTATAATTATGGATAGATATTGCTATTCCGGA 160004 | || | || | | | | || | ||| || | | ||||||||| ||||| || Sbjct 35057 TTAAAGATAAATTAACACAAGGCAAATAC-ATTGTATTAGATAGATATGTTTATTCTGGT 35115 Query 160005 GTAGCTTATTCAGCATCTAAAGGTATTGAT-ATAAATTGGTGCAAATATTCTGATATTGG 160063 || || ||| |||| ||||||| ||||| || ||| |||| | || | |||||||| Sbjct 35116 GTTGCATATACAGCTGCTAAAGGGCTTGATCATCAAT-GGTGTTTAAATCCAGATATTGG 35174 Query 160064 ATTACCTAAACCGGATAAAGTTATATTTTtatatatggat-attgaaaaaatcgcatata 160122 |||||| ||||| ||| | | |||||||| | | || ||| || ||||| | | Sbjct 35175 ATTACCAAAACCTGATTTAACTTTATTTTTAAAATTAAATGATTCAAGTAATCG--TGAA 35232 Query 160123 gaaataattatggagatgaaatatatgaaaaaatagaatttcagaaaaaaGT 160174 | | | ||| ||||||| ||||||| | ||||||||| |||||| Sbjct 35233 GGA-----TTTGGTGATGAAAGATATGAAGTTAAAGAATTTCAATTAAAAGT 35279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899650306572480