Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq185 313 4e-80 seq292 178 2e-39 seq326 156 6e-33 seq275 136 6e-27 >seq185 Length=130276 Score = 313 bits (346), Expect = 4e-80 Identities = 647/950 (68%), Gaps = 28/950 (3%) Strand=Plus/Minus Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919 |||||||| || ||| ||| |||| || |||||||| || || || | ||||| || Sbjct 111604 AGCTTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCTAATGAAAT 111545 Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTA 17979 | |||||||||||||||||| || ||||| |||||| | ||| | Sbjct 111544 GTTTTCCATAAAATCAAATGGATTTGTAACATTATAGAATTTTTTATTACCTAAAGCAAC 111485 Query 17980 TAATAATCTATCTGCTACA-AATTCGACATATTGTGACATCAAATCGCAATTCATACCTA 18038 |||||| | ||| || ||| || || |||||||| |||| || | ||||||||||| Sbjct 111484 TAATAAACGATCAGC-ACAGAACTCAACATATTGACACATTAATTTAGCATTCATACCTA 111426 Query 18039 GTAGTCTGAAA--GGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTT 18096 || ||| |||| ||||||| | | | |||| || || ||||| || | Sbjct 111425 ATAAA--GAAGCTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAACAGCTTCAGT 111368 Query 18097 TATTATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAA 18156 || || ||| || | || | |||||| ||| ||| | | |||||| Sbjct 111367 AATAATTTTTTCAACAATTTCTTCAGATGGTTTATTTTTTAAATGAGCAAA---TAATAA 111311 Query 18157 ACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAA 18216 ||| ||||||||||| |||||||||||||| | | |||||||| || ||| ||||| Sbjct 111310 ACAAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAAAAGTTAA 111251 Query 18217 CCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAA 18276 || ||||||| |||||||||||| | |||||| || || || || || ||||||||| Sbjct 111250 ACCAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAGAAAAGAA 111191 Query 18277 TATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGC-AAAACTGTATTTATTGCTC 18334 ||||| ||||| ||| || || || | |||||||||| | || | | || || || Sbjct 111190 AATACCTTCAACAGCA-GCAAAAGCAACTAATCTTTCACCGAATAAAG--CTTCTTCATC 111134 Query 18335 AG-TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGC 18393 || |||||| || ||||| || ||| ||||| || || | || ||||| Sbjct 111133 AGCAATCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAATAGC 111074 Query 18394 ATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATA 18453 ||| || |||| || || ||| | |||||| |||||||| || ||||| || ||||| Sbjct 111073 ATTGAATAAATATTCAGCTTGTTTTGGATCTTTAATATAAGTATCAATTAATAATGAATA 111014 Query 18454 CATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGG 18513 |||| ||||| || ||||||| || || |||| |||||| || |||| || || Sbjct 111013 AGTTTCTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTTCTGG 110954 Query 18514 ATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573 | ||||| || | | || |||| || ||||| |||||||| ||||| || | || Sbjct 110953 AATTTGAACTTCAGCAGAGAAATTTTCAACTAAATTTTCATTAACAATACCATCTGAAGC 110894 Query 18574 TGCGAAAAATGCCAAAACATATT----TAATGAAATGTTTTTCATTATCCTTGA---GAT 18626 || || || || ||||| | || ||| |||| | ||||||||| || | | Sbjct 110893 AGCAAAGAAAGCTAAAAC-TCTTGAAATAAAGAAACG---TTCATTATCATTTAATCTTT 110838 Query 18627 TGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATT 18686 ||||| |||| ||||||||||||| ||||| |||||| | |||||||| || | || Sbjct 110837 CATTCCAATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGCTT 110778 Query 18687 CGGCCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAATAATATATATCGTT 18746 | || | ||| || || | || || | || || || || ||||| | | | || Sbjct 110777 CAGCTTTTTTATATGCTTGCCAGATTTCATGATATTTAATTGGGAATAAAACAAAACGAC 110718 Query 18747 TATAATTTTTTATTAACATAGGTTCTTCCATTTTTCTAATATTATTAATT 18796 | ||||| | ||| | ||||| || ||||||| | | |||||| Sbjct 110717 GTTTATTTTCAACTAATAATGGTTCATC--TTTTTCTTGTTCTTTTAATT 110670 >seq292 Length=16354 Score = 178 bits (196), Expect = 2e-39 Identities = 183/238 (77%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| ||| ||||||| || || || ||||| ||||| |||||||| ||| | Sbjct 6623 AAGATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATCT 6564 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||||| |||| || || ||| ||||| |||||||||||||| || || || || Sbjct 6563 TCTGATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTGAT 6504 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||| | || || | ||| ||||| || | |||||| ||||||||||| |||||| Sbjct 6503 CAACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTAT 6444 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT-GTAAAA 156056 || || ||||| | || | |||||||| |||||||||||||| ||| |||||| Sbjct 6443 AACATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATTAAGAGGTGGTGGTAAAA 6386 >seq326 Length=266662 Score = 156 bits (172), Expect = 6e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||| || |||||||| |||||||| || |||||||| ||| ||| Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || ||| ||||| |||||||||||||| || || || || ||| Sbjct 239498 GATACTATTGACAATGTTAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACCAA 239439 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | || |||| || ||||| || | |||||| ||||| ||||| ||||| ||| Sbjct 239438 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACAAT 239379 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 || ||||| | || | ||||| || | ||||||||||| |||| Sbjct 239378 ATTCAAAAAGAATCAACATTGCATTTGGTCCTTAGATTAAGAGGTGGTG 239330 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || ||||||| || || || ||||||||||| |||||||| ||| ||| Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||| ||| ||||| |||||||||||||| || || ||||| ||| Sbjct 239726 GATACTATTGATAACGTCAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAA 239667 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | || |||| || ||||| || | ||||| ||||| |||||||| || || Sbjct 239666 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACAAC 239607 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || | ||||| || |||||||| ||||| ||| Sbjct 239606 ATTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGGT 239559 Score = 136 bits (150), Expect = 6e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || ||||||| |||||||| || || ||||| |||||||| ||| || Sbjct 240014 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA 239955 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| ||| ||||| ||||| |||||||| || || || || ||| Sbjct 239954 GACACCATCGATAACGTTAAATCCAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAA 239895 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | ||||||| || ||||| || | |||||| | ||||||||||| || || Sbjct 239894 CAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAAC 239835 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || | ||||| || |||||||||||||| ||| Sbjct 239834 ATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGGTGGT 239787 Score = 113 bits (124), Expect = 7e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 155871 GTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATA 155930 || ||| |||||| | |||| ||||| ||| || || |||||||||||||| || Sbjct 240422 GTTGAATCTTCTGACACTATTGATAACGTCAAATCCAAGATTCAAGATAAAGAAGGGATC 240363 Query 155931 CCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTA 155990 || ||||| |||||| | ||||||| ||| ||||| || | |||||| | |||||| Sbjct 240362 CCACCAGATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTTTA 240303 Query 155991 TCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||||| || || || ||||| | || | ||||| || |||||||||||||| ||| Sbjct 240302 TCAGACTACAACATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGGTGGT 240243 >seq275 Length=119121 Score = 136 bits (150), Expect = 6e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895 ||||||| || ||||| || || ||||| |||||||| ||| |||||||| ||| | Sbjct 71352 TTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCATTGACA 71293 Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955 | || ||| ||||| ||||| |||||||| || || || || |||||| | || || | Sbjct 71292 ATGTCAAATCAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGTTTAATCT 71233 Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGG 156015 ||| ||||| || | |||||| ||||||||||| ||||| || || ||||| Sbjct 71232 TTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAAAAAGAAT 71173 Query 156016 CGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | || | ||||| || || ||||||||||| ||| Sbjct 71172 CAACTTTACATTTGGTTTTGAGATTAAGAGGTGGT 71138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731868669982400