Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq185 354 2e-92 seq292 210 4e-49 seq275 194 3e-44 seq326 172 1e-37 >seq185 Length=130276 Score = 354 bits (392), Expect = 2e-92 Identities = 605/874 (69%), Gaps = 24/874 (3%) Strand=Plus/Minus Query 49576 CTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTA 49635 ||||||| || | ||||||||||||||||||| | |||||| |||||| | || Sbjct 111554 CTAATGAAATGTTTTCCATAAAATCAAATGGATTTGTAACATTATAGAATTTTT-TATTA 111496 Query 49636 TCAATA-CATATAATAATCTATCGGCTACA-AATTCAACATATTGTGACATTAATTCACA 49693 | | | || |||||| | ||| || ||| || ||||||||||| ||||||||| | Sbjct 111495 CCTAAAGCAACTAATAAACGATCAGC-ACAGAACTCAACATATTGACACATTAATTTAGC 111437 Query 49694 ATTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctac 49753 ||||||||| ||||| | |||||| |||||| | | |||| ||| ||| || Sbjct 111436 ATTCATACCTAATAAAGAAGCTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAAC 111377 Query 49754 agcttgtttaattatcataattatattatttttt--gataatttatatttaatatgattc 49811 ||||| |||| || | || | |||| || ||| ||||| ||| | |||| Sbjct 111376 AGCTTCAGTAATAATTTT--TTCAACAATTTCTTCAGATGGTTTATTTTTTAAATGA--- 111322 Query 49812 gcatatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTA 49871 ||| ||| |||||| |||||||||||||||||||| || || | | | || |||||||| Sbjct 111321 GCAAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTT 111262 Query 49872 CTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTA 49931 ||||||||| || |||||||| ||||| ||||| | |||||| ||||| ||||| | Sbjct 111261 GAAAAAGTTAAACCAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAA 111202 Query 49932 CTAGAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAAT 49991 | ||||||||| ||||| || ||| ||||| || | || |||| | || || | | Sbjct 111201 CCAGAAAAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATAAAGCT 111142 Query 49992 TTATCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTT 50051 | ||||| ||||| ||| ||||||||| ||||||| ||| ||| | || || || Sbjct 111141 TCTTCATCAGCAATCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTT 111082 Query 50052 TCTATAGCTTTAAATA---ATTCA--tttttttCATNNNNNNNNNNNNNNNNNNNNNNNA 50106 || ||||| || |||| ||||| || |||| | Sbjct 111081 TCAATAGCATTGAATAAATATTCAGCTTGTTTT-----GGATCTTTAATATAAGTATCAA 111027 Query 50107 TTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATT 50166 ||||||| ||||| |||| ||||| | | |||||| ||||| || |||||| Sbjct 111026 TTAATAATGAATAAGTTTCTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAAC 110967 Query 50167 GTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAA 50226 | | ||||||| | |||||||| | | |||| |||||||||||| ||| |||| Sbjct 110966 ATTTAGCTTCTGGAATTTGAACTTCAGCAGAGAAATTTTCAACTAAATTTTCATTAACAA 110907 Query 50227 TACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTT 50286 ||||||| || || || ||||| |||||||| | |||||| ||||||||| | Sbjct 110906 TACCATCTGAAGCAGCAAAGAAAGCTAAAACTCTTGAAATAAAGAAACGTTCATTATCAT 110847 Query 50287 TTAAATTTTC---CCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAA 50343 |||| |||| |||| | || ||| ||||||||||| | |||||| ||||||| Sbjct 110846 TTAATCTTTCATTCCAATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAA 110787 Query 50344 ATGATGCTACGGATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTA 50403 |||| ||| | | ||||||||| ||| | || ||| || || ||| || |||| | Sbjct 110786 ATGAAGCTTCAGCTTTTTTATATGCTTGCCAGATTTCATGATATTTAATTGGGAATAAAA 110727 Query 50404 CATATCGTTTAGTAtttttttCTAATATCGGTTC 50437 || | || |||||| |||||| ||||| Sbjct 110726 CAAAACGACGTTTATTTTCAACTAATAATGGTTC 110693 >seq292 Length=16354 Score = 210 bits (232), Expect = 4e-49 Identities = 185/231 (80%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | ||| ||||||||||| || | ||||| || ||||||||||| Sbjct 6393 ACCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGA 6452 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| |||| || ||||||||||||||||||||||| | |||||||||||||| Sbjct 6453 TAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGG 6512 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||||||||| ||||| ||| ||||| |||| ||| || ||||| || Sbjct 6513 AATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAAC 6572 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| |||||||||||||| ||||| ||||||| ||| || ||||| || Sbjct 6573 TTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCATCTT 6623 >seq275 Length=119121 Score = 194 bits (214), Expect = 3e-44 Identities = 178/225 (79%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||||||||||||||| | | || || ||||||||||| | ||||| || | Sbjct 71128 GTTCAATAATACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGT 71187 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | ||||||||||| |||| |||| || ||||||||||||||||||||||| | |||| Sbjct 71188 TGTAATCAGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTT 71247 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 |||||||||| || |||||||| ||||| ||||| ||| ||||| || | ||| | Sbjct 71248 GATCAGGTGGAATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAG 71307 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523 | ||||| ||||||| |||||||| ||||||||||| ||||||| Sbjct 71308 AAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAA 71352 >seq326 Length=266662 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | | || ||||| || || | ||||| ||||| |||||||| Sbjct 239331 ACCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGA 239390 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| |||| || |||||||||||||| || ||||| | ||||| |||||||| Sbjct 239391 TAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGG 239450 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||||||||| ||||| ||| ||||| |||| |||||| ||||| || Sbjct 239451 AATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAAC 239510 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||| || ||||||||||| || || |||| ||| || ||||| Sbjct 239511 TTCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | ||| || |||||||| || | ||||| || || || || Sbjct 239557 ATACCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCT 239616 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| |||| | || || |||||||||||||| || ||||| | |||||||| ||| Sbjct 239617 GATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGT 239676 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| ||| || ||| |||| ||| || ||||| Sbjct 239677 GGAATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCA 239736 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||| |||||||| ||||| ||||||| || || ||||| Sbjct 239737 ACTTCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || |||||||| || | ||||| |||||| |||||| Sbjct 240013 ATACCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCA 240072 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| |||| | || || ||||||||||||||||| || || | |||||||||||| Sbjct 240073 GATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGT 240132 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| ||| ||||| |||| ||||| ||||| Sbjct 240133 GGAATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCA 240192 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||| || ||||||||||| || ||||| | || || ||||| Sbjct 240193 ACTTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | ||| || |||||||| || | ||||| || || || || Sbjct 239785 ATACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCT 239844 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| || || |||| || |||||||||||||| || || || | |||||||||||| Sbjct 239845 GATAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGT 239904 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| ||| || ||| || | ||||| ||||| Sbjct 239905 GGAATACCTTCTTTGTCTTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCA 239964 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||||||||| |||||||| || ||||||| || || ||||| Sbjct 239965 ACTTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 116 bits (128), Expect = 7e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | ||| || |||||||| || | ||||| || || || || Sbjct 240241 ATACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCT 240300 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| || || |||| || ||||||||||||||||| || || | |||||||| ||| Sbjct 240301 GATAAAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGT 240360 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || ||| || ||| |||| || || ||||| Sbjct 240361 GGGATCCCTTCTTTATCTTGAATCTTGGATTTGACGTTATCAATAGTGTCAGAAGATTCA 240420 Query 192487 AC 192488 || Sbjct 240421 AC 240422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984475408631400