Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq185 349 6e-91 seq292 201 2e-46 seq326 194 3e-44 seq275 188 1e-42 >seq185 Length=130276 Score = 349 bits (386), Expect = 6e-91 Identities = 624/916 (68%), Gaps = 14/916 (2%) Strand=Plus/Minus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 |||||| || || |||||| ||||||| || || || ||||| || ||||||| || Sbjct 111601 TTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCTAATGAAATGTT 111542 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATA 38949 | ||||||||||||||||||| | |||||| |||||| | || | | | || || Sbjct 111541 TTCCATAAAATCAAATGGATTTGTAACATTATAGAATTTTT-TATTACCTAAAGCAACTA 111483 Query 38950 ATAATCTATCGGCCACA-AATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008 |||| | ||| || ||| || ||||||||||| ||||||||| | ||||||||| ||| Sbjct 111482 ATAAACGATCAGC-ACAGAACTCAACATATTGACACATTAATTTAGCATTCATACCTAAT 111424 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068 || | |||||| |||||| | | |||| ||| ||| ||||||| |||| Sbjct 111423 AAAGAAGCTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAACAGCTTCAGTAATA 111364 Query 39069 atcataattatattatttttt--gataatttatatttaatatgattcgcatataGTAAAC 39126 || | || | |||| || ||| ||||| ||| | |||| ||| ||| ||||| Sbjct 111363 ATTTT--TTCAACAATTTCTTCAGATGGTTTATTTTTTAAATGA---GCAAATAATAAAC 111309 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 | |||||||| |||||||||||||| || | | | || |||||||| ||||||||| | Sbjct 111308 AAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAAAAGTTAAAC 111249 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246 | |||||||| ||||| ||||| | |||||| ||||| ||||| || ||||||||| | Sbjct 111248 CAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAGAAAAGAAAA 111189 Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306 |||| || ||| ||||| || | || |||| | || || | || ||||| || Sbjct 111188 TACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATAAAGCTTCTTCATCAGCAA 111129 Query 39307 TCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 39366 |||| ||| |||||||| ||||||| ||| ||| | || || |||| ||||| || | Sbjct 111128 TCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAATAGCATTGA 111069 Query 39367 ATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATTT 39426 |||| | | ||||| ||| Sbjct 111068 ATAAATATTCAGCTTGTTTTGGATCTTTAATATAAGTATCAATTAATAATGAATAAGTTT 111009 Query 39427 CAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAATACT 39486 | ||||| | | |||||| ||||| || |||||| | ||||||| | | Sbjct 111008 CTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTTCTGGAATTT 110949 Query 39487 GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGA 39546 ||||||| | | |||| |||||||||||| ||| ||||||||||| || || || | Sbjct 110948 GAACTTCAGCAGAGAAATTTTCAACTAAATTTTCATTAACAATACCATCTGAAGCAGCAA 110889 Query 39547 AGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTC---CCAAG 39603 |||| |||||||| | |||||| ||||||||| ||||| |||| |||| Sbjct 110888 AGAAAGCTAAAACTCTTGAAATAAAGAAACGTTCATTATCATTTAATCTTTCATTCCAAT 110829 Query 39604 ATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTTT 39663 | || ||| ||||||||||| | |||||| |||||||| || ||| | | ||||| Sbjct 110828 CATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGCTTCAGCTTTTT 110769 Query 39664 TATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTAtttt 39723 |||| ||| | || ||| || || ||| || ||||| ||| | || |||||| Sbjct 110768 TATATGCTTGCCAGATTTCATGATATTTAATTGGGAATAAAACAAAACGACGTTTATTTT 110709 Query 39724 tttCTAATATCGGTTC 39739 |||||| ||||| Sbjct 110708 CAACTAATAATGGTTC 110693 >seq292 Length=16354 Score = 201 bits (222), Expect = 2e-46 Identities = 183/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || ||| ||||||||||| || | ||||| ||| |||||||| || Sbjct 6393 ACCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGA 6452 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || | || || ||||||||||||||||| ||||| | ||||| |||||||| Sbjct 6453 TAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGG 6512 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || |||||||||||||| ||||| ||| ||||| |||||||| || ||||| || Sbjct 6513 AATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAAC 6572 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| |||||||||||||| ||||| ||||||| || || ||||| || Sbjct 6573 TTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCATCTT 6623 >seq326 Length=266662 Score = 194 bits (214), Expect = 3e-44 Identities = 181/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || ||| || |||||||| || | ||||| ||| || || ||| Sbjct 239557 ATACCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCT 239616 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || |||| || |||||||||||||| |||||||| | ||||| || ||| Sbjct 239617 GATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGT 239676 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| ||||| ||| || ||| |||||||| || ||||| Sbjct 239677 GGAATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCA 239736 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| |||||| |||||||| ||||| ||||||| ||| || ||||| Sbjct 239737 ACTTCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 185 bits (204), Expect = 2e-41 Identities = 179/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || ||| || |||||||| || | ||||| ||| || || ||| Sbjct 239785 ATACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCT 239844 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || || |||||||||||||| ||||| || | ||||| |||||| Sbjct 239845 GATAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGT 239904 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| ||||| ||| || ||| || || ||||| ||||| Sbjct 239905 GGAATACCTTCTTTGTCTTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCA 239964 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||||||||| |||||||| || ||||||| ||| || ||||| Sbjct 239965 ACTTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || | || ||||| || || | ||||| |||||| ||||| || Sbjct 239331 ACCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGA 239390 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||| | || | || || |||||||||||||| |||||||| | |||||||||||||| Sbjct 239391 TAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGG 239450 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || |||||||||||||| ||||| ||| ||||| ||||||||||| ||||| || Sbjct 239451 AATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAAC 239510 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||| || ||||||||||| || || |||| || || ||||| Sbjct 239511 TTCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 176 bits (194), Expect = 8e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || |||||||| || | ||||| ||||| ||||| Sbjct 240013 ATACCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCA 240072 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || |||| || |||||||||||||||||||| || | ||||| |||||| Sbjct 240073 GATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGT 240132 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| ||| ||||| ||||| ||||| ||||| Sbjct 240133 GGAATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCA 240192 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||| || ||||||||||| || ||||| | ||| || ||||| Sbjct 240193 ACTTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 131 bits (144), Expect = 3e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || ||| || |||||||| || | ||||| ||| || || ||| Sbjct 240241 ATACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCT 240300 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || || |||||||||||||||||||| || | ||||| || ||| Sbjct 240301 GATAAAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGT 240360 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| || || ||| || ||| ||||| || || ||||| Sbjct 240361 GGGATCCCTTCTTTATCTTGAATCTTGGATTTGACGTTATCAATAGTGTCAGAAGATTCA 240420 Query 172020 AC 172021 || Sbjct 240421 AC 240422 >seq275 Length=119121 Score = 188 bits (208), Expect = 1e-42 Identities = 176/224 (79%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 |||||||||||||| | || || || ||||||||||| | ||||| ||| || ||| Sbjct 71133 ATAATACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAA 71192 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || ||||||| || | || || ||||||||||||||||| ||||| | ||||| ||| Sbjct 71193 TCAGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCA 71252 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || |||||||| ||||| ||||| ||| ||||| || ||||| || ||| Sbjct 71253 GGTGGAATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGAT 71312 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 || ||||||| |||||||| ||||||||||| ||||||| ||| Sbjct 71313 TCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905131881631200