Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq291 179 5e-40 seq182 104 3e-17 seq274 86.0 8e-12 >seq291 Length=72889 Score = 179 bits (198), Expect = 5e-40 Identities = 243/336 (72%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 172322 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTGCTTACTACaaaaaaaaTTGT 172381 ||| ||| |||| |||||| || || | ||||| | ||||| |||||| || Sbjct 10456 ACAATTAAGATTTAATTTAAAAGATGATACATTCCCATTATTAACTACCAAAAAA---GT 10512 Query 172382 ATATACTAA---TATCCTCAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 172438 | || || |||| | |||| | | ||| ||||| |||||| || ||| || Sbjct 10513 CTTCACAAAGGGTATCATATTAGAATTACTTTGGTTTATTCAAGGTTGTACAGATGGTAA 10572 Query 172439 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 172498 | |||||| ||| | |||||||||| ||||| | | |||||| ||||||||||||||| Sbjct 10573 AAAATTAAGTGAAAAAGGTGTTAAAATTTGGGAAGGTAATGGAAGTCGTGAATTTTTAGA 10632 Query 172499 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATG 172558 | || || || ||||| ||| |||||||||||||| ||| |||||||||| ||||| Sbjct 10633 TAAATTAGGTTTAACTGATAGACGTGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATG 10692 Query 172559 GAGACATGCAGGGGCTCAATATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGA 172618 ||||||| || ||| |||||| || |||||| | ||||| |||| ||||| || || Sbjct 10693 GAGACATTTCGGTGCTAAATATACTGATTGTGATGCTGATTATTCAGGTCAAGGTGTTGA 10752 Query 172619 CCAATTAAGTCAAACTATTAATACTTTACAAAACAA 172654 |||||| | || |||| ||| || ||||||| Sbjct 10753 TCAATTAGCTGAAGTTATTCATAAATT-GAAAACAA 10787 >seq182 Length=54856 Score = 104 bits (114), Expect = 3e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009 ||||| |||||||||||| ||| ||| || ||||||| |||| |||| | ||||||||| Sbjct 36757 ATTAAAGTTGCTCAATTAGCTGGTTATATTTCAGAACATACAGGTTATCATCATGGTGAA 36698 Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 166069 ||| |||| || || || ||| || |||||||| |||||| |||||||||| Sbjct 36697 CAATCTTTAATCACTACAATTGTTGGGTTAGCACAAGATTTCGTTGGTTCAAATAATATT 36638 Query 166070 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCT 166129 ||| | ||| | ||| || ||||| ||| || ||||||||| | | Sbjct 36637 AATTTATTATTACCAAAAGGTTCTTTCGGTACAAGAAATATGGGTGGTAAAGATGCATCA 36578 Query 166130 GCATCAAGATATATTTATAC 166149 || | |||||||||||||| Sbjct 36577 GCTGCGAGATATATTTATAC 36558 >seq274 Length=58465 Score = 86.0 bits (94), Expect = 8e-12 Identities = 164/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 194590 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 194649 ||||| | || |||| |||||| || | ||||| |||||| |||||||||||| Sbjct 36707 ATTTTCTTTGGACCAATTTATTATCAAAAATTAAAACATATGGTTTTAGATAAAATGCAT 36648 Query 194650 GCTAGAAGTCATGGG--CAAGTAACTACTTTACATCGACAACCAAATTGTGGTCGTTCTC 194707 || ||| | | || |||| | || |||| ||||||| | | ||| | || Sbjct 36647 GCAAGA-GCAAGAGGTCCAAG-AGCTGTTTTAACAAGACAACCTACTGAAGGTAGATCAA 36590 Query 194708 AAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTA 194767 || ||| ||||||||||| || |||||||||| ||| ||| || | | |||||||| Sbjct 36589 GAGATGGTGGTTTAAGATTAGGTGAAATGGAAAGAGATTGTGTTATTGCATATGGTGCTT 36530 Query 194768 CTCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTG 194825 | ||||| ||| |||||| | | | | |||||| | ||| | || ||| |||| Sbjct 36529 CACAATTGTTATTGGAAAGATTAATGATTTCATCTGATGCATTTGATGTTGATATTTG 36472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632486722172320