Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09-
21] 364 sequences; 15,901,152 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq326 152 5e-32
seq292 147 2e-30
seq275 136 4e-27
seq277 91.5 1e-13
>seq326
Length=266662
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| |||| |||||||||||||| | ||||| ||| | ||
Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| ||| ||||| |||||||| |||||||| || || || |||||
Sbjct 239726 GATACTATTGATAACGTCAAATCAAAA-ATCCAAGATAAAGAAGGTATTCCACCAGATCA 239668
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||||||| || || || || ||||| | || || |||| | | ||||| || ||
Sbjct 239667 ACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACAA 239608
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||| ||||| ||| |||| ||||| || ||||| | || ||
Sbjct 239607 CATTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGG 239560
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| | || ||||||||||| || | ||||| ||| | |
Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || || | |||| ||||| || |||||||| ||||| || || || |||||
Sbjct 240182 GACACTATTGACAATGTTAAATCAAAA-ATTCAAGACAAGGAAGGTATTCCACCTGATCA 240124
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||||||||||| ||||| || ||||| | || || |||| | | || ||||| ||
Sbjct 240123 ACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAA 240064
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| ||||| ||||| ||| |||| ||||| ||| ||||| | || ||
Sbjct 240063 TATCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGG 240016
Score = 131 bits (144), Expect = 2e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| | || ||||| || ||||| | ||||| ||| | |
Sbjct 240014 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA 239955
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| |||| | ||| || |||||||||||||| || || || |||||
Sbjct 239954 GACACCATCGATAACGTTAAATCCAAA-ATTCAAGACAAAGAAGGTATTCCACCTGATCA 239896
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||||||||||| || || || ||||| | || ||| | | | ||||| || ||
Sbjct 239895 ACAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAA 239836
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||||||| ||||| ||| |||| ||||| || ||||
Sbjct 239835 CATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATT 239797
Score = 129 bits (142), Expect = 5e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| |||| || | || ||||||||||| || | ||||| ||| | |
Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || || | |||| ||||| |||||||| |||||||| || || || || ||
Sbjct 239498 GATACTATTGACAATGTTAAATCAAAA-ATCCAAGATAAAGAAGGTATTCCACCTGACCA 239440
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||||||| || || || || ||||| | || ||| |||| | | || ||||| ||
Sbjct 239439 ACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACAA 239380
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
|||||||| ||||| ||| | || |||||
Sbjct 239379 TATTCAAAAAGAATCAACATTGCATTTGGT 239350
Score = 102 bits (112), Expect = 7e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| ||||| |||||||| || || || ||||||||||||||||| ||||| || |||
Sbjct 240386 AAGATTCAAGATAAAGAAGGGATCCCACCAGATCAACAACGTTTGATTTTTGCTGGTAAA 240327
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| | || ||| | | | ||||| || ||||||||||| ||||| ||| ||||
Sbjct 240326 CAATTAGAAGATGGTCGTACTTTATCAGACTACAACATTCAAAAAGAATCAACATTACAT 240267
Query 24908 TTGGTGTTGCGATT 24921
||||| || ||||
Sbjct 240266 TTGGTCTTAAGATT 240253
>seq292
Length=16354
Score = 147 bits (162), Expect = 2e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || ||| ||||||| |||| |||||||| ||||| | ||||| ||| | |
Sbjct 6621 GATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATCTTC 6562
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || ||| ||| || ||||| |||||||| || || || |||||
Sbjct 6561 TGATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTGATCA 6502
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||||||| |||||||| || ||||| | || ||| |||| | || ||||||||
Sbjct 6501 ACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTATAA 6442
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||||||| ||||| ||| |||| || || || ||||
Sbjct 6441 CATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATT 6403
>seq275
Length=119121
Score = 136 bits (150), Expect = 4e-27
Identities = 153/205 (75%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776
||||||| |||| ||||| || ||||| | ||||| ||| | | || || | || |
Sbjct 71352 TTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCATTGACA 71293
Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836
|| ||| ||| || |||||||||||||| || || || |||||||||||||| ||||
Sbjct 71292 ATGTCAAATCAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGTTTAATCT 71233
Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896
|||| || ||||| | || ||| |||| | || ||||| ||||||||||| ||||
Sbjct 71232 TTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAAAAAGAAT 71173
Query 24897 CGACACTACACTTGGTGTTGCGATT 24921
| || |||| ||||| ||| ||||
Sbjct 71172 CAACTTTACATTTGGTTTTGAGATT 71148
>seq277
Length=184736
Score = 91.5 bits (100), Expect = 1e-13
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139
||| || |||| ||| || || || ||||| || || |||||| |||||||| |
Sbjct 159839 AATTGAAGCTAAGTTACAAACAGCAACTTCATCTGGTGATGAGTATTCAACAATTTCAGT 159780
Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199
||| || || | ||||| |||| || || | |||||| |||| |||||||||
Sbjct 159779 ACATAAGTTTGATGATTTGATGATACCCAAGTTCTTTTGATTAGTTTTCTTGTTACAAGC 159720
Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232
||||||||||||||| || || || ||||||||
Sbjct 159719 ATCTTTGTAAAGCATGTATGGAGTACCAGTTTC 159687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895552965920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |