Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq326 152 5e-32 seq292 147 2e-30 seq275 136 4e-27 seq277 91.5 1e-13 >seq326 Length=266662 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| |||| |||||||||||||| | ||||| ||| | || Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| ||||| |||||||| |||||||| || || || ||||| Sbjct 239726 GATACTATTGATAACGTCAAATCAAAA-ATCCAAGATAAAGAAGGTATTCCACCAGATCA 239668 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||||| || || || || ||||| | || || |||| | | ||||| || || Sbjct 239667 ACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACAA 239608 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||| ||||| ||| |||| ||||| || ||||| | || || Sbjct 239607 CATTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGG 239560 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| | || ||||||||||| || | ||||| ||| | | Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || || | |||| ||||| || |||||||| ||||| || || || ||||| Sbjct 240182 GACACTATTGACAATGTTAAATCAAAA-ATTCAAGACAAGGAAGGTATTCCACCTGATCA 240124 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||||||||| ||||| || ||||| | || || |||| | | || ||||| || Sbjct 240123 ACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAA 240064 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| ||||| ||| |||| ||||| ||| ||||| | || || Sbjct 240063 TATCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGG 240016 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| | || ||||| || ||||| | ||||| ||| | | Sbjct 240014 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA 239955 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| | ||| || |||||||||||||| || || || ||||| Sbjct 239954 GACACCATCGATAACGTTAAATCCAAA-ATTCAAGACAAAGAAGGTATTCCACCTGATCA 239896 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||||||||| || || || ||||| | || ||| | | | ||||| || || Sbjct 239895 ACAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAA 239836 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||||||||| ||||| ||| |||| ||||| || |||| Sbjct 239835 CATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATT 239797 Score = 129 bits (142), Expect = 5e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| |||| || | || ||||||||||| || | ||||| ||| | | Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || | |||| ||||| |||||||| |||||||| || || || || || Sbjct 239498 GATACTATTGACAATGTTAAATCAAAA-ATCCAAGATAAAGAAGGTATTCCACCTGACCA 239440 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||||| || || || || ||||| | || ||| |||| | | || ||||| || Sbjct 239439 ACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACAA 239380 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| ||||| ||| | || ||||| Sbjct 239379 TATTCAAAAAGAATCAACATTGCATTTGGT 239350 Score = 102 bits (112), Expect = 7e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| ||||| |||||||| || || || ||||||||||||||||| ||||| || ||| Sbjct 240386 AAGATTCAAGATAAAGAAGGGATCCCACCAGATCAACAACGTTTGATTTTTGCTGGTAAA 240327 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || | || ||| | | | ||||| || ||||||||||| ||||| ||| |||| Sbjct 240326 CAATTAGAAGATGGTCGTACTTTATCAGACTACAACATTCAAAAAGAATCAACATTACAT 240267 Query 24908 TTGGTGTTGCGATT 24921 ||||| || |||| Sbjct 240266 TTGGTCTTAAGATT 240253 >seq292 Length=16354 Score = 147 bits (162), Expect = 2e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || ||| ||||||| |||| |||||||| ||||| | ||||| ||| | | Sbjct 6621 GATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATCTTC 6562 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || ||| ||| || ||||| |||||||| || || || ||||| Sbjct 6561 TGATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTGATCA 6502 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||||| |||||||| || ||||| | || ||| |||| | || |||||||| Sbjct 6501 ACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTATAA 6442 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||||||||| ||||| ||| |||| || || || |||| Sbjct 6441 CATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATT 6403 >seq275 Length=119121 Score = 136 bits (150), Expect = 4e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 ||||||| |||| ||||| || ||||| | ||||| ||| | | || || | || | Sbjct 71352 TTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCATTGACA 71293 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || ||| ||| || |||||||||||||| || || || |||||||||||||| |||| Sbjct 71292 ATGTCAAATCAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGTTTAATCT 71233 Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 |||| || ||||| | || ||| |||| | || ||||| ||||||||||| |||| Sbjct 71232 TTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAAAAAGAAT 71173 Query 24897 CGACACTACACTTGGTGTTGCGATT 24921 | || |||| ||||| ||| |||| Sbjct 71172 CAACTTTACATTTGGTTTTGAGATT 71148 >seq277 Length=184736 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139 ||| || |||| ||| || || || ||||| || || |||||| |||||||| | Sbjct 159839 AATTGAAGCTAAGTTACAAACAGCAACTTCATCTGGTGATGAGTATTCAACAATTTCAGT 159780 Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199 ||| || || | ||||| |||| || || | |||||| |||| ||||||||| Sbjct 159779 ACATAAGTTTGATGATTTGATGATACCCAAGTTCTTTTGATTAGTTTTCTTGTTACAAGC 159720 Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232 ||||||||||||||| || || || |||||||| Sbjct 159719 ATCTTTGTAAAGCATGTATGGAGTACCAGTTTC 159687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895552965920