Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq292 107 2e-18 seq326 104 2e-17 >seq292 Length=16354 Score = 107 bits (118), Expect = 2e-18 Identities = 170/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 107550 TTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG 107609 || || |||||||||||||| |||||||||||||| |||||||||||| | ||| || Sbjct 6626 TTCAAGATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAA 6567 Query 107610 GCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTG 107669 || |||||| | | | | || ||| ||| ||| ||||||||||| | || Sbjct 6566 TCTTCTGATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCT 6507 Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 ||||| || | | || | ||| |||||||| | || || | | ||| | | || Sbjct 6506 GATCAACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGAT 6447 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAAT 107789 || ||||||||||| || || || || || | || || ||||| |||| || ||| Sbjct 6446 TATAACATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATTAAGAGGTGGTGGTAAA 6387 Query 107790 AAAA 107793 |||| Sbjct 6386 AAAA 6383 >seq326 Length=266662 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| || ||||| |||||||| ||||| ||||| | ||| || || | Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | || ||| ||| || ||||||||||| | || ||||| Sbjct 239726 GATACTATTGATAACGTCAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAA 239667 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | | |||| || |||||||| | || |||| | ||| | | ||||||||| Sbjct 239666 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACAAC 239607 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| || || || || || |||| || |||||| |||| || Sbjct 239606 ATTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGG 239560 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||||||||| || || ||||| || || | ||| || || Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | | || ||| ||| ||| || || ||||| | || ||||| Sbjct 240182 GACACTATTGACAATGTTAAATCAAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 240123 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | | |||| ||| |||||||| | || |||| | ||| | | || ||||| Sbjct 240122 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAAT 240063 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || ||||| || || || || || |||| ||||||||| |||| || Sbjct 240062 ATCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGG 240016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875030482796