Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq292 188 1e-42 seq326 181 2e-40 seq275 158 2e-33 >seq292 Length=16354 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| |||||||| ||||| ||||| | || || ||| | | Sbjct 6619 TGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATCTTCTG 6560 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| ||||| ||| ||||||||| |||||||| ||||||| Sbjct 6559 ATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTGATCAAC 6500 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| |||||||||||||| ||| |||||| ||| | |||||||| | Sbjct 6499 AACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTATAACA 6440 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | ||||||||||| || | |||||||| ||| |||||||||| ||| Sbjct 6439 TTCAAAAAGAATCAACATTACATTTAGTCTTAAGATTAAGAGGTGGT 6393 >seq326 Length=266662 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| |||||||| ||||| |||||| | || || ||| | || Sbjct 239785 TGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCCG 239726 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | || || ||| ||||| ||| ||||||||| |||||||| ||||||| Sbjct 239725 ATACTATTGATAACGTCAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAAC 239666 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | ||||| || |||||||||||||| || |||||| ||| |||| || || | Sbjct 239665 AACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACAACA 239606 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || | ||||| || ||| |||| ||||| |||| Sbjct 239605 TTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGGTA 239558 Score = 159 bits (176), Expect = 5e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || || ||||| || ||| | || || ||| | | Sbjct 239557 TGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCAG 239498 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| ||||| ||| ||||||||| |||||||| || |||| Sbjct 239497 ATACTATTGACAATGTTAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACCAAC 239438 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | ||||| || |||||||||||||| ||| |||||| ||| | ||||| |||| Sbjct 239437 AACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACAATA 239378 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAAT 146262 | ||||||||||| || | ||||| || | |||||||||| ||| ||| Sbjct 239377 TTCAAAAAGAATCAACATTGCATTTGGTCCTTAGATTAAGAGGTGGTGAAT 239327 Score = 159 bits (176), Expect = 5e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| || || || ||||| || ||| | || || ||| | | Sbjct 240241 TGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCAG 240182 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| ||| ||||| ||| || ||||| |||||||| ||||||| Sbjct 240181 ACACTATTGACAATGTTAAATCAAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAAC 240122 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| |||||||||||||| || |||||| ||| | ||||| |||| Sbjct 240121 AACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAATA 240062 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || | ||||| || || |||| ||||| |||| Sbjct 240061 TCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGGTA 240014 Score = 149 bits (164), Expect = 1e-30 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | ||||| || || || || || |||||| | || || ||| ||| | Sbjct 240013 TGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA- 239955 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | || || ||| ||||| ||| |||||||| |||||||| |||||| Sbjct 239954 GACACCATCGATAACGTTAAATCCAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAA 239895 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | ||||| || |||||||||||||| ||| | | || ||| |||| || || Sbjct 239894 CAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAAC 239835 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || ||||||||||| || | ||||| || ||| |||||||||| |||| Sbjct 239834 ATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGGTGGTA 239786 Score = 129 bits (142), Expect = 9e-25 Identities = 130/169 (77%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || |||||| | || || ||| || || ||| ||||||||| || ||||| |||||| Sbjct 240410 GACACTATTGATAACGTCAAATCCAAGATTCAAGATAAAGAAGGGATCCCACCAGATCAA 240351 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | |||||||| |||||||||||||| ||| | | || ||| |||| || || Sbjct 240350 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAAC 240291 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || ||||||||||| || | ||||| || ||| |||||||||| |||| Sbjct 240290 ATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGGTGGTA 240242 >seq275 Length=119121 Score = 158 bits (174), Expect = 2e-33 Identities = 167/220 (76%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 146040 TTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATT 146099 ||| | ||||| ||||| || || || ||||| | || || ||| | ||||| ||| Sbjct 71356 TTCGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCATT 71297 Query 146100 CAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTC 146159 | ||||| ||| ||||| ||| |||||||| |||||||| ||||||||| | | Sbjct 71296 GACAATGTCAAATCAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGTTTA 71237 Query 146160 ATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAA 146219 || ||||| |||||||||||||| ||| |||||| ||| | ||||| || || |||||| Sbjct 71236 ATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAAAAA 71177 Query 146220 GAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||||| ||| | ||||| || || |||||||||| |||| Sbjct 71176 GAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGGTA 71137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786162822942880