Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq292 168 5e-37 seq326 152 4e-32 seq275 145 6e-30 >seq292 Length=16354 Score = 168 bits (186), Expect = 5e-37 Identities = 207/279 (74%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || ||||| | || ||||||||||||||||||||||| | | || | | ||| || Sbjct 6412 ACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTACCATCTTCT 6471 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | || || | ||| ||||| || |||||||| ||||| ||||| Sbjct 6472 AATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTATCTTG- 6530 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||||| ||||||| | || | ||| |||||| ||| ||||| | || || ||||| Sbjct 6531 AATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAACTTCTAAGGTAATGGTTTT 6590 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT-TTTAAAACGTATGCGTTTTATCGC----- 29810 || ||||| ||||||||||| || ||||| || || ||| ||| ||||| || Sbjct 6591 ACCTGTTAAAGTTTTAACAAAAATTTGCATCTTGAATTCGTCTGCAATTTATTGCTTCTT 6650 Query 29811 TCTTATAACATAAAGATTATCAATAGTATTAAGAGTATT 29849 |||||| | || ||| | || |||||||| || ||| Sbjct 6651 TCTTATTCAAGAATTATTGTTAAGAGTATTAAAAGAATT 6689 >seq326 Length=266662 Score = 152 bits (168), Expect = 4e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || |||||||| | || ||||||||||| || || ||||| | Sbjct 240016 CCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGAT 240075 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | || || | |||||| |||||| | ||||| | ||| ||||| || ||| Sbjct 240076 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGA 240135 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| |||||||| ||| ||| | || | |||||| ||| ||| || Sbjct 240136 ATACCTTCCTTGTCTTG-AATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAAC 240194 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| |||||||| ||||| || ||||| || || || ||||| Sbjct 240195 TTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | | |||||||| | || ||||||||||||||||| || || | Sbjct 239560 CCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGAT 239619 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | || || | |||||| ||||| | || || | ||| ||||| || ||| Sbjct 239620 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGA 239679 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||| ||||| | |||| |||||| | || | ||| || ||| ||| ||| Sbjct 239680 ATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACT 239739 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| |||||||| || |||||||||||||| || || ||||| Sbjct 239740 TCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 140 bits (154), Expect = 2e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || |||||||| | || |||||||||||||| || ||||| | | ||| | | ||| Sbjct 239347 AGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGATAAGGTTCTACCATCT 239406 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | |||||| ||||| | || || | ||| || || || |||||||| ||||| ||| Sbjct 239407 TCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGAATACCTTCTTTATCT 239466 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | |||| ||| ||| | || | ||| || ||| ||| ||||| | ||| |||||| Sbjct 239467 TGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAACTTCTAAAGTGATAGTT 239526 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || |||||||| || ||||| Sbjct 239527 TTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 132 bits (146), Expect = 4e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| | || ||||||||||||||||| || || | | || ||| ||| || Sbjct 239806 ACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCTTCT 239865 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| ||||| | ||||| | ||| ||||| || |||||||| ||||||||||| Sbjct 239866 AATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCTTTGTCTTG- 239924 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||| || | || | ||||| || ||| ||||| | ||| || || || Sbjct 239925 AATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAACTTCTAAAGTAATGGTCTT 239984 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || |||||||| || || ||||| Sbjct 239985 ACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 100 bits (110), Expect = 2e-16 Identities = 121/162 (75%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| | || ||||||||||||||||| || || | | || ||| ||| || Sbjct 240262 ACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCTTCT 240321 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | ||||| | ||| ||||| || || || || ||||| ||||| Sbjct 240322 AATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGGATCCCTTCTTTATCTTG- 240380 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| || | |||||| | || | |||||||||| ||| || Sbjct 240381 AATCTTGGATTTGACGTTATCAATAGTGTCAGAAGATTCAAC 240422 >seq275 Length=119121 Score = 145 bits (160), Expect = 6e-30 Identities = 165/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || || | || |||||||| | || ||||||||||||||||| ||||| | Sbjct 71139 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGAT 71198 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | |||||| |||||| | || || | ||| ||||| || ||| Sbjct 71199 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 71258 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||||||||| |||||||| ||||||| | || | || |||||| ||| || Sbjct 71259 ATACCTTCTTTGTCTTG-AATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAAC 71317 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 ||| | || || || || |||||||| |||||||| || Sbjct 71318 TTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385217491071324