Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq291 187 3e-42 seq277 96.9 4e-15 seq182 91.5 2e-13 seq364 89.7 7e-13 seq274 89.7 7e-13 seq344 87.8 2e-12 seq280 86.0 8e-12 >seq291 Length=72889 Score = 187 bits (206), Expect = 3e-42 Identities = 472/714 (66%), Gaps = 23/714 (3%) Strand=Plus/Plus Query 168411 GATAGAACAAAGATAGGTACATTTTCTTTATTTGG---AAAACAATTGGAATTTGATTTA 168467 ||||||||| | || |||| | | ||||||| | |||||| |||| ||||| Sbjct 10415 GATAGAACAGGTACTGGGACATATAGTATATTTGGTCCACCACAATTAAGATTTAATTTA 10474 Query 168468 AGTGGTGGAACTATCCCACTTCTTACTACCaaaaaaaTTGTATACACTAACATTCTTAAA 168527 | | || || ||||| | | |||||||||||| || | ||| || | | | | Sbjct 10475 AAAGATGATACATTCCCATTATTAACTACCAAAAAA---GTCTTCACAAAGGGTATCATA 10531 Query 168528 ---GAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGT 168584 ||| | | ||| |||| |||||| || ||| ||| |||||| ||| | |||| Sbjct 10532 TTAGAATTACTTTGGTTTATTCAAGGTTGTACAGATGGTAAAAAATTAAGTGAAAAAGGT 10591 Query 168585 GTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAA 168644 |||||| ||||| | | |||||| |||||||||||||||| || ||||| || || Sbjct 10592 GTTAAAATTTGGGAAGGTAATGGAAGTCGTGAATTTTTAGATAAATTAGGTTTAACTGAT 10651 Query 168645 AGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAA 168704 ||| |||||||||||||||||| |||||||||| |||||||||||| || ||| || Sbjct 10652 AGACGTGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTCGGTGCTAAA 10711 Query 168705 TATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAACTATA 168764 |||| ||| |||||| | ||||| | || ||||| || || |||||| | || ||| Sbjct 10712 TATACTGATTGTGATGCTGATTATTCAGGTCAAGGTGTTGATCAATTAGCTGAAGTTATT 10771 Query 168765 AATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGATGTACCA 168824 ||| || | | ||||| | || | | || |||| | ||| || |||| Sbjct 10772 CATAAATTGAAAACAAATCCTTATGATCGTCGTATTATAATGTCTGCATGGAATCCACCA 10831 Query 168825 CAACTTGATAAAATGGTTCTTCCCCCTTGTCACACTTTAGTGCAATTTTATG-------- 168876 | | | |||| | || || ||||| ||| |||||||||| Sbjct 10832 GATTTCCCAATTATGGCATTACCACCATGTCATGTTTTTTCACAATTTTATGTTAATTTT 10891 Query 168877 --TAAGGAA--AAAATCAATCTTAGATTGTCAGTTGTATCAAAGATCAGCTGATTTAGGA 168932 ||| ||| ||| || ||| ||| || ||||||||||| ||| | || Sbjct 10892 CCTAAAGAAGGTAAACCACAATTATCATGTTTATTATATCAAAGATCTTGCGATATGGGT 10951 Query 168933 TTAGGAGTACCTTATAATATTGGATTTTATTCATTTTTAACACTTGTGCTAAGTAAATGG 168992 | ||||| |||| |||||||| | |||| | || ||||| || | | ||| | Sbjct 10952 CTTGGAGTTCCTTTTAATATTGCTTCTTATGCTTTATTAACTAAAATGAT-TGCAAAAGT 11010 Query 168993 TG-TAATTTGACGCCTGGAAAGTTTATTCATACTTTTGGAGATGTTCACGTGTATTCAAA 169051 || | || || ||| | ||||| |||||| | || ||| ||| || ||| | | Sbjct 11011 TGTTGATATGGATTGTGGTGAATTTATACATACTATGGGTGATTCTCATGTTTATAAAGA 11070 Query 169052 CCATGTTGAACCTTTAAAGGTTCAATTGAAAAGAAAACCATATTCTTTTCCAAA 169105 |||||||| ||||||| | ||| | | |||| |||| ||| || ||||| Sbjct 11071 TCATGTTGATGCTTTAAAAGAACAAATTACAAGAGAACCTTATGAATTCCCAAA 11124 >seq277 Length=184736 Score = 96.9 bits (106), Expect = 4e-15 Identities = 227/336 (68%), Gaps = 15/336 (4%) Strand=Plus/Minus Query 192789 GAACTTCATCCTTGTGGAATGTTTGGAATTGTAGCTGGAGTTATACCATTTTCCGATAGA 192848 ||| ||||||||| || || || ||| |||| | |||| ||||| | ||| Sbjct 38254 GAAATTCATCCTTCAATGATTTTAGGTGTTGCAGCTTCAATTATTCCATTCCCAGATCAT 38195 Query 192849 ACACAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGATTTATT 192908 | |||||| |||| || || | | | |||||| ||||||||| || || || || Sbjct 38194 AATCAATCTCCTCGTAATACTTATCAATCAGCTATGGGTAAACAAGCTATGGGTGTT-TT 38136 Query 192909 CCGTGTCACAACTTAAAA-------ACGGAAACAGTATCTCATACATTAAATTATCCACA 192961 | | |||| ||| | | ||| || | | ||| || |||||||||| Sbjct 38135 CT---TAACAAATTATAGTGTTCGTATGGATACTATGGCAAATATCTTGTATTATCCACA 38079 Query 192962 AAAACCCCTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGATTATCCAAAT 193019 |||||| |||| ||| ||| || | || || |||| | || ||||| |||| ||| | Sbjct 38078 AAAACCTCTTGCTACAACAAGAGCTATGGAACATTTGA-AATTTAGAGAATTA-CCAGCT 38021 Query 193020 GGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAGACAGTATT 193079 || |||||||| || ||||| || || ||| | ||||||||||||||||| ||| Sbjct 38020 GGACAAAATGCTATAGTGGCTATTGCATGTTATTCAGGTTATAATCAAGAAGATTCTATG 37961 Query 193080 ATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTT 193115 ||| | ||| || | ||| || ||||||||||| Sbjct 37960 ATTATGAATCAATCAAGTATAGATCGAGGATTATTT 37925 Score = 82.4 bits (90), Expect = 1e-10 Identities = 211/319 (66%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 193715 ATTAACAAACCATGGTTTTGATTATACTGGGTCTGAAACAATGTATTGTGGGTTTACTGG 193774 ||||| | | ||||||| | | | | || | |||| |||||| ||| ||| || Sbjct 37304 ATTAAGAGAACATGGTTATCAATCAAGAGGTTTTGAAGTTATGTATAATGGTCATACAGG 37245 Query 193775 TAAAAGAATTGAAAATA----AAATTTTTATAGGGCCAACTTATTATCATCGTCTTAAAC 193830 ||||| |||| ||| ||||||| | || |||||||||||||| | | | || Sbjct 37244 TAAAA-AATT---AATGGCCCAAATTTTCTTTGGTCCAACTTATTATCAAAGATTAAGAC 37189 Query 193831 ATATGGTTAAGGATAAAATGCATGCTAGAAGTCATGGACAAGTGACTACTTTACATCGAC 193890 |||||||| | |||||||| ||||| ||| || | ||| | |||| ||| Sbjct 37188 ATATGGTTGATGATAAAATTCATGCAAGAGCAAGAGGTCCAGTTCAAATTTTAACAAGAC 37129 Query 193891 AACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACT 193950 ||||| | |||||||| || ||| || ||| | ||||| |||||||| || | Sbjct 37128 AACCAGTTGAAGGTCGTTCAAGAGATGGTGGGTTACGTTTTGGTGAAATGGAACGTGATT 37069 Query 193951 GTATTTTAGTTCATGGTGCTACTCAATTCTTGAATGAAAGAATGTTTTTGTATTCTGATC 194010 |||| | | |||||||| | || |||| |||||| || | ||| ||| Sbjct 37068 GTATGATTGCACATGGTGCAGCAGCTTTTATGAAGGAAAGATTGATGGAAGCTTCAGATG 37009 Query 194011 CTTTTCAAGTCGATGTTTG 194029 ||||| ||| ||||||| Sbjct 37008 CTTTTAGAGTTCATGTTTG 36990 >seq182 Length=54856 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 162998 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAA 163057 ||||| |||||||||||| ||| ||| || | ||||| |||| ||| | || |||||| Sbjct 36757 ATTAAAGTTGCTCAATTAGCTGGTTATATTTCAGAACATACAGGTTATCATCATGGTGAA 36698 Query 163058 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 163117 ||| |||| || || || ||| || |||||||| |||||| |||||||||| Sbjct 36697 CAATCTTTAATCACTACAATTGTTGGGTTAGCACAAGATTTCGTTGGTTCAAATAATATT 36638 Query 163118 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 163177 ||| | ||| | ||| || ||||| ||| || ||||||||| | | Sbjct 36637 AATTTATTATTACCAAAAGGTTCTTTCGGTACAAGAAATATGGGTGGTAAAGATGCATCA 36578 Query 163178 GCATCAAGATATATTTATAC 163197 || | |||||||||||||| Sbjct 36577 GCTGCGAGATATATTTATAC 36558 >seq364 Length=334480 Score = 89.7 bits (98), Expect = 7e-13 Identities = 112/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 51891 AATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCA 51950 ||| | |||||||| | ||||||||||||||| || |||||| | | || |||| Sbjct 163521 AATCGTCAACCAACTTTACATAAAGCTTCTATGATGGGTCATAAAGTCAGAGTTTTACCA 163462 Query 51951 G-TAAAAACA-TTTAAAATGA-ATTTGGCTATGACTAAAGCATATAATGCTGATTTTGAT 52007 | | |||| | |||| | | ||| |||| || || || |||||||||||||||||| Sbjct 163461 GGTGAAAAGACTTTACGTTTACATTATGCTAACACCAATGCTTATAATGCTGATTTTGAT 163402 Query 52008 GGGGATGAAATGAATTTACATGTTCCTCAA 52037 || |||||||||||| | ||| | || ||| Sbjct 163401 GGTGATGAAATGAATATGCATTTCCCACAA 163372 >seq274 Length=58465 Score = 89.7 bits (98), Expect = 7e-13 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 193445 ACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGGTATGA 193503 ||| ||| |||| |||||||||| ||| || |||| | |||| || ||||||||| | Sbjct 37041 ACCAGAATTAGGTGATAAATTTTCGTCAAGACATGGTC-AAAAGGGTGTTTGTGGTATTA 36983 Query 193504 TTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTA 193563 || | |||||||||| | ||||||| | | ||||| ||||||||||||||| | Sbjct 36982 TTGTTCAACAAGAAGATTTACCATTTAATGATGATGGTATTTCACCAGATATTATTATGA 36923 Query 193564 ATCCAAATTGTATTCCATCCAGAATGAC 193591 |||| || || | ||||| | ||||| Sbjct 36922 ATCCTCATGGTTTCCCATCTCGTATGAC 36895 Score = 86.0 bits (94), Expect = 8e-12 Identities = 164/239 (69%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 193794 ATTTTTATAGGGCCAACTTATTATCATCGTCTTAAACATATGGTTAAGGATAAAATGCAT 193853 ||||| | || |||| ||||||||| | |||||||||||| |||||||||||| Sbjct 36707 ATTTTCTTTGGACCAATTTATTATCAAAAATTAAAACATATGGTTTTAGATAAAATGCAT 36648 Query 193854 GCTAGA---AGTCATGGACAAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCT 193910 || ||| || | | |||| | || |||| ||||||| | | ||| | || Sbjct 36647 GCAAGAGCAAG--AGGTCCAAGAG-CTGTTTTAACAAGACAACCTACTGAAGGTAGATCA 36591 Query 193911 CAAGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCT 193970 || ||| ||||||||||| || |||||||| | ||| ||| || | | |||||||| Sbjct 36590 AGAGATGGTGGTTTAAGATTAGGTGAAATGGAAAGAGATTGTGTTATTGCATATGGTGCT 36531 Query 193971 ACTCAATTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTG 194029 | ||||| || |||||| | | | | |||||| | ||| | || ||| |||| Sbjct 36530 TCACAATTGTTATTGGAAAGATTAATGATTTCATCTGATGCATTTGATGTTGATATTTG 36472 >seq344 Length=31598 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 51834 CTTGAAGTTGGAGACTTGGTTAAAAGACAATTGATGGATGGTGATGATGTACTATTAAAT 51893 ||| || ||| || | ||| ||||||| || |||||||| | ||| |||| ||| Sbjct 13237 CTTCAATATGGTGATGTTGTTGAAAGACATTTAGAAGATGGTGACGTTGTTTTATTCAAT 13296 Query 51894 AGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCAGTA 51953 || ||||| || | |||| | || || | | | | |||||| ||| Sbjct 13297 AGACAACCTTCATTACATAGATTATCAATTTTATCACATTATGCTAAAATCAGACCTTGG 13356 Query 51954 AAAACATTTA----AAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGG 52009 | ||| || | |||||||| || | || || | |||||||||||||||||||||| Sbjct 13357 AGAACTTTCAGATTAAATGAATGTG--TTTG--TACACCATATAATGCTGATTTTGATGG 13412 Query 52010 GGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAA 52058 ||||||||||||||||||||||| ||| | | | ||| | |||||| Sbjct 13413 TGATGAAATGAATTTACATGTTCCACAAACTGAGGAAGCAAGAGCTGAA 13461 >seq280 Length=108631 Score = 86.0 bits (94), Expect = 8e-12 Identities = 135/189 (71%), Gaps = 12/189 (6%) Strand=Plus/Minus Query 114834 TACTTATGGACGAATTGCTTCAAGATCTGGTTTAAGTTTTAAGAATGGAATTGAAGTAGG 114893 ||||||||| || ||||| | | |||||| | | |||| |||| ||| | ||| Sbjct 25066 TACTTATGGTCGTGTTGCTCCTCGTTCTGGTCTTGCTGTTAAACATGGTATTTCAACAGG 25007 Query 114894 AGCAGGTGTTATCGATGAAGATTATCAAGAT-AATTT--AATGGTTATTTTACATAACCA 114950 ||||||||||| |||| ||||||| || | || || ||| || |||| ||| || Sbjct 25006 TGCAGGTGTTATTGATGCAGATTATAGAGGTGAAGTTAAAATTGTACTTTT---TAATCA 24950 Query 114951 TTCAGATGTTGATTTTAAAATTGAAGTTAAA---GATAGAATTGCTCAATTAATTGTTGA 115007 ||| | ||||||||| ||||| || ||| || || |||||||||||| || | || Sbjct 24949 TTCCAAAGTTGATTTTCAAATTAAA---AAAGGTGAAAGGATTGCTCAATTAGTTTTAGA 24893 Query 115008 AAATGTTGT 115016 ||| |||| Sbjct 24892 AAAAATTGT 24884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635174709941920