Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09-
21] 364 sequences; 15,901,152 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq291 131 2e-25
seq221 93.3 6e-14
seq182 89.7 7e-13
>seq291
Length=72889
Score = 131 bits (144), Expect = 2e-25
Identities = 243/354 (69%), Gaps = 2/354 (1%)
Strand=Plus/Plus
Query 180427 AGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGATATTGGTGT 180486
||||||| | ||| | || |||||| ||| || ||| |||| ||| | |||||
Sbjct 10534 AGAATTACTTTGGTTTATTCAAGGTTGTACAGATGGTAAAAAATTAAGTGAAAAAGGTGT 10593
Query 180487 TAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATTTTCG 180546
|||| | ||| | | |||||| ||| | ||||||||| | || || | | |
Sbjct 10594 TAAAATTTGGGAAGGTAATGGAAGTCGTGAATTTTTAGATAAATTAGGTTTAACTGATAG 10653
Query 180547 AAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATA 180606
| |||||||||||||| ||| |||||||||| |||||||||||| || ||| ||||
Sbjct 10654 ACGTGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTCGGTGCTAAATA 10713
Query 180607 TATTGACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGA 180666
|| ||| |||||| | | ||| || |||||| | || |||||| ||||||| |
Sbjct 10714 TACTGATTGTGATGCTGATTATTCAGGTCAAGGTGTTGATCAATTAGCTGAAGTTATTCA 10773
Query 180667 AACTATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGGAATGTATCACA 180726
| | |||| ||||| | || | || || || | |||||| | || |
Sbjct 10774 TAAATTGAAAACAAATCCTTATGATCGTCGTATTATAATGTCTGCATGGAATCCACCAGA 10833
Query 180727 ATTACCAGATATGGCTCTTCCACCATGTCACTGTTTGGT-ACAATTTTATGTTA 180779
|| ||| |||||| | ||||||||||| ||||| | ||||||||||||||
Sbjct 10834 TTTCCCAATTATGGCATTACCACCATGTCA-TGTTTTTTCACAATTTTATGTTA 10886
>seq221
Length=23070
Score = 93.3 bits (102), Expect = 6e-14
Identities = 134/186 (72%), Gaps = 6/186 (3%)
Strand=Plus/Minus
Query 52973 GTTCTATTAAATCGTCAACCAACATTACATAAACCTTCCATGCAAGCATTTATCGTAGTT 53032
||||| || ||||||||||| ||||||||||| |||||| ||| ||||| |||
Sbjct 6283 GTTCTTTTCAATCGTCAACCTTCATTACATAAAATGTCCATGATGGCAC--ATCGT-GTT 6227
Query 53033 A---TTATTGATGGTAAAACTTTAAGGATGAATTTAGCTATGGCTAAAGCTTACAATGCA 53089
| |||| | |||||| || | |||||| | | || | |||| |||||
Sbjct 6226 AAAGTTATGCCTTACTCAACTTTTAGATTAAATTTATCAGTTACTTCACCTTATAATGCG 6167
Query 53090 GATTTTGATGGAGATGAAATGAATTTACATATTCCTCAGTCTTATGAAGCTACTGCAGAA 53149
||||| ||||| ||||||||||||||||| |||| || ||| | ||| | | || |||
Sbjct 6166 GATTTCGATGGTGATGAAATGAATTTACACGTTCCACAATCTGAAGAAACAAGAGCTGAA 6107
Query 53150 TTAATG 53155
||||||
Sbjct 6106 TTAATG 6101
>seq182
Length=54856
Score = 89.7 bits (98), Expect = 7e-13
Identities = 147/209 (70%), Gaps = 10/209 (5%)
Strand=Plus/Minus
Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945
||||| |||||||| || |||||| ||| ||||||| || | |||| | |||||||||
Sbjct 36757 ATTAAAGTTGCTCAATTAGCTGGTTATATTTCAGAACATACAGGTTATCATCATGGTGAA 36698
Query 172946 CAAAACCTTTGTGAA--ACTATAA---TAAAATTTGCACAGGATTTTGTAGGTACAAATA 173000
| || |||| || |||| || | || ||||| ||||| || ||| ||||||
Sbjct 36697 C--AATCTTT---AATCACTACAATTGTTGGGTTAGCACAAGATTTCGTTGGTTCAAATA 36643
Query 173001 ACATAACATTACTTGAACCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGATT 173060
| || | ||| | |||| | ||| || ||||| ||| | || |||||||||
Sbjct 36642 ATATTAATTTATTATTACCAAAAGGTTCTTTCGGTACAAGAAATATGGGTGGTAAAGATG 36583
Query 173061 CAGCCGCATCAAGGTATATTTATACTAAA 173089
|| | || | || |||||||||||| ||
Sbjct 36582 CATCAGCTGCGAGATATATTTATACTGAA 36554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655277018476000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |