Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq291 131 2e-25 seq221 93.3 6e-14 seq182 89.7 7e-13 >seq291 Length=72889 Score = 131 bits (144), Expect = 2e-25 Identities = 243/354 (69%), Gaps = 2/354 (1%) Strand=Plus/Plus Query 180427 AGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGATATTGGTGT 180486 ||||||| | ||| | || |||||| ||| || ||| |||| ||| | ||||| Sbjct 10534 AGAATTACTTTGGTTTATTCAAGGTTGTACAGATGGTAAAAAATTAAGTGAAAAAGGTGT 10593 Query 180487 TAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATTTTCG 180546 |||| | ||| | | |||||| ||| | ||||||||| | || || | | | Sbjct 10594 TAAAATTTGGGAAGGTAATGGAAGTCGTGAATTTTTAGATAAATTAGGTTTAACTGATAG 10653 Query 180547 AAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATA 180606 | |||||||||||||| ||| |||||||||| |||||||||||| || ||| |||| Sbjct 10654 ACGTGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTCGGTGCTAAATA 10713 Query 180607 TATTGACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGA 180666 || ||| |||||| | | ||| || |||||| | || |||||| ||||||| | Sbjct 10714 TACTGATTGTGATGCTGATTATTCAGGTCAAGGTGTTGATCAATTAGCTGAAGTTATTCA 10773 Query 180667 AACTATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGGAATGTATCACA 180726 | | |||| ||||| | || | || || || | |||||| | || | Sbjct 10774 TAAATTGAAAACAAATCCTTATGATCGTCGTATTATAATGTCTGCATGGAATCCACCAGA 10833 Query 180727 ATTACCAGATATGGCTCTTCCACCATGTCACTGTTTGGT-ACAATTTTATGTTA 180779 || ||| |||||| | ||||||||||| ||||| | |||||||||||||| Sbjct 10834 TTTCCCAATTATGGCATTACCACCATGTCA-TGTTTTTTCACAATTTTATGTTA 10886 >seq221 Length=23070 Score = 93.3 bits (102), Expect = 6e-14 Identities = 134/186 (72%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 52973 GTTCTATTAAATCGTCAACCAACATTACATAAACCTTCCATGCAAGCATTTATCGTAGTT 53032 ||||| || ||||||||||| ||||||||||| |||||| ||| ||||| ||| Sbjct 6283 GTTCTTTTCAATCGTCAACCTTCATTACATAAAATGTCCATGATGGCAC--ATCGT-GTT 6227 Query 53033 A---TTATTGATGGTAAAACTTTAAGGATGAATTTAGCTATGGCTAAAGCTTACAATGCA 53089 | |||| | |||||| || | |||||| | | || | |||| ||||| Sbjct 6226 AAAGTTATGCCTTACTCAACTTTTAGATTAAATTTATCAGTTACTTCACCTTATAATGCG 6167 Query 53090 GATTTTGATGGAGATGAAATGAATTTACATATTCCTCAGTCTTATGAAGCTACTGCAGAA 53149 ||||| ||||| ||||||||||||||||| |||| || ||| | ||| | | || ||| Sbjct 6166 GATTTCGATGGTGATGAAATGAATTTACACGTTCCACAATCTGAAGAAACAAGAGCTGAA 6107 Query 53150 TTAATG 53155 |||||| Sbjct 6106 TTAATG 6101 >seq182 Length=54856 Score = 89.7 bits (98), Expect = 7e-13 Identities = 147/209 (70%), Gaps = 10/209 (5%) Strand=Plus/Minus Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945 ||||| |||||||| || |||||| ||| ||||||| || | |||| | ||||||||| Sbjct 36757 ATTAAAGTTGCTCAATTAGCTGGTTATATTTCAGAACATACAGGTTATCATCATGGTGAA 36698 Query 172946 CAAAACCTTTGTGAA--ACTATAA---TAAAATTTGCACAGGATTTTGTAGGTACAAATA 173000 | || |||| || |||| || | || ||||| ||||| || ||| |||||| Sbjct 36697 C--AATCTTT---AATCACTACAATTGTTGGGTTAGCACAAGATTTCGTTGGTTCAAATA 36643 Query 173001 ACATAACATTACTTGAACCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGATT 173060 | || | ||| | |||| | ||| || ||||| ||| | || ||||||||| Sbjct 36642 ATATTAATTTATTATTACCAAAAGGTTCTTTCGGTACAAGAAATATGGGTGGTAAAGATG 36583 Query 173061 CAGCCGCATCAAGGTATATTTATACTAAA 173089 || | || | || |||||||||||| || Sbjct 36582 CATCAGCTGCGAGATATATTTATACTGAA 36554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655277018476000