Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09-
21] 364 sequences; 15,901,152 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq291 185 1e-41
seq182 109 7e-19
seq277 93.3 5e-14
seq364 89.7 6e-13
seq344 87.8 2e-12
seq274 86.0 8e-12
>seq291
Length=72889
Score = 185 bits (204), Expect = 1e-41
Identities = 244/336 (73%), Gaps = 7/336 (2%)
Strand=Plus/Plus
Query 171534 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTACTTACTACaaaaaaaaTTGT 171593
||| ||| |||| |||||| || || | |||||| | ||||| |||||| ||
Sbjct 10456 ACAATTAAGATTTAATTTAAAAGATGATACATTCCCATTATTAACTACCAAAAAA---GT 10512
Query 171594 ATATACTAA---TATCCTTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 171650
| || || |||| | |||| | | ||| ||||| |||||| || ||| ||
Sbjct 10513 CTTCACAAAGGGTATCATATTAGAATTACTTTGGTTTATTCAAGGTTGTACAGATGGTAA 10572
Query 171651 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 171710
| |||||| ||| | |||||||||| ||||| | | |||||| |||||||||||||||
Sbjct 10573 AAAATTAAGTGAAAAAGGTGTTAAAATTTGGGAAGGTAATGGAAGTCGTGAATTTTTAGA 10632
Query 171711 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATG 171770
| || || || ||||| ||| |||||||||||||||||| |||||||||| |||||
Sbjct 10633 TAAATTAGGTTTAACTGATAGACGTGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATG 10692
Query 171771 GAGACATGCAGGGGCTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGA 171830
||||||| || ||| |||||| || ||| || | ||||| |||| ||||| || ||
Sbjct 10693 GAGACATTTCGGTGCTAAATATACTGATTGTGATGCTGATTATTCAGGTCAAGGTGTTGA 10752
Query 171831 CCAATTAAGTCAAACTATTAATACTTTACAAAACAA 171866
|||||| | || |||| ||| || |||||||
Sbjct 10753 TCAATTAGCTGAAGTTATTCATAAATT-GAAAACAA 10787
>seq182
Length=54856
Score = 109 bits (120), Expect = 7e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219
|||||||||||||||||| ||| ||| || ||||||| |||| |||| | |||||||||
Sbjct 36757 ATTAAAGTTGCTCAATTAGCTGGTTATATTTCAGAACATACAGGTTATCATCATGGTGAA 36698
Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279
||| |||| || || || ||| || |||||||| |||||| ||||||||||
Sbjct 36697 CAATCTTTAATCACTACAATTGTTGGGTTAGCACAAGATTTCGTTGGTTCAAATAATATT 36638
Query 165280 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 165339
||| | ||| | ||| || ||||| ||| || ||||||||| | |
Sbjct 36637 AATTTATTATTACCAAAAGGTTCTTTCGGTACAAGAAATATGGGTGGTAAAGATGCATCA 36578
Query 165340 GCATCAAGATATATTTATAC 165359
|| | ||||||||||||||
Sbjct 36577 GCTGCGAGATATATTTATAC 36558
>seq277
Length=184736
Score = 93.3 bits (102), Expect = 5e-14
Identities = 226/336 (67%), Gaps = 15/336 (4%)
Strand=Plus/Minus
Query 192342 GAACTTCATCCTTGTGGAATGTTTGGGATTGTAGCTGGAGTTATACCATTTTCCGATAGA 192401
||| ||||||||| || || || ||| |||| | |||| ||||| | |||
Sbjct 38254 GAAATTCATCCTTCAATGATTTTAGGTGTTGCAGCTTCAATTATTCCATTCCCAGATCAT 38195
Query 192402 ACACAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGGTTTATT 192461
| |||||| |||| || || | | | |||||| ||||||||| || |||| | ||
Sbjct 38194 AATCAATCTCCTCGTAATACTTATCAATCAGCTATGGGTAAACAAGCTAT-GGGTGTTTT 38136
Query 192462 CCTTGCCACAACTTAAAA-------ACGGAAACAGTCTCTCATACATTAAATTATCCACA 192514
| | |||| ||| | | ||| || | | ||| || ||||||||||
Sbjct 38135 CTTA---ACAAATTATAGTGTTCGTATGGATACTATGGCAAATATCTTGTATTATCCACA 38079
Query 192515 AAAACCACTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGATTATCCAAAT 192572
|||||| |||| ||| ||| || | || || |||| | || ||||| |||| ||| |
Sbjct 38078 AAAACCTCTTGCTACAACAAGAGCTATGGAACATTTGA-AATTTAGAGAATTA-CCAGCT 38021
Query 192573 GGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGCTATAACCAAGAAGACAGTATT 192632
|| |||||||| || ||||| || || ||| | || ||||| |||||||| |||
Sbjct 38020 GGACAAAATGCTATAGTGGCTATTGCATGTTATTCAGGTTATAATCAAGAAGATTCTATG 37961
Query 192633 ATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTT 192668
||| | ||| || | ||| || |||||||||||
Sbjct 37960 ATTATGAATCAATCAAGTATAGATCGAGGATTATTT 37925
>seq364
Length=334480
Score = 89.7 bits (98), Expect = 6e-13
Identities = 112/150 (75%), Gaps = 3/150 (2%)
Strand=Plus/Minus
Query 50341 AATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCA 50400
||| | |||||||| | ||||||||||||||| || |||||| | | || ||||
Sbjct 163521 AATCGTCAACCAACTTTACATAAAGCTTCTATGATGGGTCATAAAGTCAGAGTTTTACCA 163462
Query 50401 G-TAAAAACA-TTTAAAATGAATTTA-GCTATGACTAAAGCATATAATGCTGATTTTGAT 50457
| | |||| | |||| | | ||| |||| || || || ||||||||||||||||||
Sbjct 163461 GGTGAAAAGACTTTACGTTTACATTATGCTAACACCAATGCTTATAATGCTGATTTTGAT 163402
Query 50458 GGGGATGAAATGAATTTACATGTTCCTCAA 50487
|| |||||||||||| | ||| | || |||
Sbjct 163401 GGTGATGAAATGAATATGCATTTCCCACAA 163372
>seq344
Length=31598
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 8/229 (3%)
Strand=Plus/Plus
Query 50284 CTTGAAGTTGGAGACTTGGTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAAT 50343
||| || ||| || | ||| ||||||| || ||||||||| | ||| |||| |||
Sbjct 13237 CTTCAATATGGTGATGTTGTTGAAAGACATTTAGAAGATGGTGACGTTGTTTTATTCAAT 13296
Query 50344 AGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCAGTA 50403
|| ||||| || | |||| | || || | | | | |||||| |||
Sbjct 13297 AGACAACCTTCATTACATAGATTATCAATTTTATCACATTATGCTAAAATCAGACCTTGG 13356
Query 50404 AAAACATTTA----AAATGAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGG 50459
| ||| || | |||||||| | | || || | ||||||||||||||||||||||
Sbjct 13357 AGAACTTTCAGATTAAATGAATGTG--TTTG--TACACCATATAATGCTGATTTTGATGG 13412
Query 50460 GGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAA 50508
||||||||||||||||||||||| ||| | | | ||| | ||||||
Sbjct 13413 TGATGAAATGAATTTACATGTTCCACAAACTGAGGAAGCAAGAGCTGAA 13461
>seq274
Length=58465
Score = 86.0 bits (94), Expect = 8e-12
Identities = 164/238 (69%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 193347 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 193406
||||| | || |||| |||||| || | ||||| |||||| ||||||||||||
Sbjct 36707 ATTTTCTTTGGACCAATTTATTATCAAAAATTAAAACATATGGTTTTAGATAAAATGCAT 36648
Query 193407 GCTAGAAGTCATGGG--CAAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTC 193464
|| ||| | | || |||| | || |||| ||||||| | | ||| | ||
Sbjct 36647 GCAAGA-GCAAGAGGTCCAAGAG-CTGTTTTAACAAGACAACCTACTGAAGGTAGATCAA 36590
Query 193465 AAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTA 193524
|| ||| ||||||||||| || |||||||||| ||| ||| || | | ||||||||
Sbjct 36589 GAGATGGTGGTTTAAGATTAGGTGAAATGGAAAGAGATTGTGTTATTGCATATGGTGCTT 36530
Query 193525 CTCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTG 193582
| ||||| ||| |||||| | | | | |||||| | ||| | || ||| ||||
Sbjct 36529 CACAATTGTTATTGGAAAGATTAATGATTTCATCTGATGCATTTGATGTTGATATTTG 36472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628528340183040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |