Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq291 185 1e-41 seq182 109 7e-19 seq277 93.3 5e-14 seq364 89.7 6e-13 seq344 87.8 2e-12 seq274 86.0 8e-12 >seq291 Length=72889 Score = 185 bits (204), Expect = 1e-41 Identities = 244/336 (73%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 171534 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTACTTACTACaaaaaaaaTTGT 171593 ||| ||| |||| |||||| || || | |||||| | ||||| |||||| || Sbjct 10456 ACAATTAAGATTTAATTTAAAAGATGATACATTCCCATTATTAACTACCAAAAAA---GT 10512 Query 171594 ATATACTAA---TATCCTTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 171650 | || || |||| | |||| | | ||| ||||| |||||| || ||| || Sbjct 10513 CTTCACAAAGGGTATCATATTAGAATTACTTTGGTTTATTCAAGGTTGTACAGATGGTAA 10572 Query 171651 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 171710 | |||||| ||| | |||||||||| ||||| | | |||||| ||||||||||||||| Sbjct 10573 AAAATTAAGTGAAAAAGGTGTTAAAATTTGGGAAGGTAATGGAAGTCGTGAATTTTTAGA 10632 Query 171711 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATG 171770 | || || || ||||| ||| |||||||||||||||||| |||||||||| ||||| Sbjct 10633 TAAATTAGGTTTAACTGATAGACGTGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATG 10692 Query 171771 GAGACATGCAGGGGCTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGA 171830 ||||||| || ||| |||||| || ||| || | ||||| |||| ||||| || || Sbjct 10693 GAGACATTTCGGTGCTAAATATACTGATTGTGATGCTGATTATTCAGGTCAAGGTGTTGA 10752 Query 171831 CCAATTAAGTCAAACTATTAATACTTTACAAAACAA 171866 |||||| | || |||| ||| || ||||||| Sbjct 10753 TCAATTAGCTGAAGTTATTCATAAATT-GAAAACAA 10787 >seq182 Length=54856 Score = 109 bits (120), Expect = 7e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 |||||||||||||||||| ||| ||| || ||||||| |||| |||| | ||||||||| Sbjct 36757 ATTAAAGTTGCTCAATTAGCTGGTTATATTTCAGAACATACAGGTTATCATCATGGTGAA 36698 Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279 ||| |||| || || || ||| || |||||||| |||||| |||||||||| Sbjct 36697 CAATCTTTAATCACTACAATTGTTGGGTTAGCACAAGATTTCGTTGGTTCAAATAATATT 36638 Query 165280 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 165339 ||| | ||| | ||| || ||||| ||| || ||||||||| | | Sbjct 36637 AATTTATTATTACCAAAAGGTTCTTTCGGTACAAGAAATATGGGTGGTAAAGATGCATCA 36578 Query 165340 GCATCAAGATATATTTATAC 165359 || | |||||||||||||| Sbjct 36577 GCTGCGAGATATATTTATAC 36558 >seq277 Length=184736 Score = 93.3 bits (102), Expect = 5e-14 Identities = 226/336 (67%), Gaps = 15/336 (4%) Strand=Plus/Minus Query 192342 GAACTTCATCCTTGTGGAATGTTTGGGATTGTAGCTGGAGTTATACCATTTTCCGATAGA 192401 ||| ||||||||| || || || ||| |||| | |||| ||||| | ||| Sbjct 38254 GAAATTCATCCTTCAATGATTTTAGGTGTTGCAGCTTCAATTATTCCATTCCCAGATCAT 38195 Query 192402 ACACAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGGTTTATT 192461 | |||||| |||| || || | | | |||||| ||||||||| || |||| | || Sbjct 38194 AATCAATCTCCTCGTAATACTTATCAATCAGCTATGGGTAAACAAGCTAT-GGGTGTTTT 38136 Query 192462 CCTTGCCACAACTTAAAA-------ACGGAAACAGTCTCTCATACATTAAATTATCCACA 192514 | | |||| ||| | | ||| || | | ||| || |||||||||| Sbjct 38135 CTTA---ACAAATTATAGTGTTCGTATGGATACTATGGCAAATATCTTGTATTATCCACA 38079 Query 192515 AAAACCACTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGATTATCCAAAT 192572 |||||| |||| ||| ||| || | || || |||| | || ||||| |||| ||| | Sbjct 38078 AAAACCTCTTGCTACAACAAGAGCTATGGAACATTTGA-AATTTAGAGAATTA-CCAGCT 38021 Query 192573 GGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGCTATAACCAAGAAGACAGTATT 192632 || |||||||| || ||||| || || ||| | || ||||| |||||||| ||| Sbjct 38020 GGACAAAATGCTATAGTGGCTATTGCATGTTATTCAGGTTATAATCAAGAAGATTCTATG 37961 Query 192633 ATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTT 192668 ||| | ||| || | ||| || ||||||||||| Sbjct 37960 ATTATGAATCAATCAAGTATAGATCGAGGATTATTT 37925 >seq364 Length=334480 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 50341 AATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCA 50400 ||| | |||||||| | ||||||||||||||| || |||||| | | || |||| Sbjct 163521 AATCGTCAACCAACTTTACATAAAGCTTCTATGATGGGTCATAAAGTCAGAGTTTTACCA 163462 Query 50401 G-TAAAAACA-TTTAAAATGAATTTA-GCTATGACTAAAGCATATAATGCTGATTTTGAT 50457 | | |||| | |||| | | ||| |||| || || || |||||||||||||||||| Sbjct 163461 GGTGAAAAGACTTTACGTTTACATTATGCTAACACCAATGCTTATAATGCTGATTTTGAT 163402 Query 50458 GGGGATGAAATGAATTTACATGTTCCTCAA 50487 || |||||||||||| | ||| | || ||| Sbjct 163401 GGTGATGAAATGAATATGCATTTCCCACAA 163372 >seq344 Length=31598 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 50284 CTTGAAGTTGGAGACTTGGTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAAT 50343 ||| || ||| || | ||| ||||||| || ||||||||| | ||| |||| ||| Sbjct 13237 CTTCAATATGGTGATGTTGTTGAAAGACATTTAGAAGATGGTGACGTTGTTTTATTCAAT 13296 Query 50344 AGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCAGTA 50403 || ||||| || | |||| | || || | | | | |||||| ||| Sbjct 13297 AGACAACCTTCATTACATAGATTATCAATTTTATCACATTATGCTAAAATCAGACCTTGG 13356 Query 50404 AAAACATTTA----AAATGAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGG 50459 | ||| || | |||||||| | | || || | |||||||||||||||||||||| Sbjct 13357 AGAACTTTCAGATTAAATGAATGTG--TTTG--TACACCATATAATGCTGATTTTGATGG 13412 Query 50460 GGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAA 50508 ||||||||||||||||||||||| ||| | | | ||| | |||||| Sbjct 13413 TGATGAAATGAATTTACATGTTCCACAAACTGAGGAAGCAAGAGCTGAA 13461 >seq274 Length=58465 Score = 86.0 bits (94), Expect = 8e-12 Identities = 164/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 193347 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 193406 ||||| | || |||| |||||| || | ||||| |||||| |||||||||||| Sbjct 36707 ATTTTCTTTGGACCAATTTATTATCAAAAATTAAAACATATGGTTTTAGATAAAATGCAT 36648 Query 193407 GCTAGAAGTCATGGG--CAAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTC 193464 || ||| | | || |||| | || |||| ||||||| | | ||| | || Sbjct 36647 GCAAGA-GCAAGAGGTCCAAGAG-CTGTTTTAACAAGACAACCTACTGAAGGTAGATCAA 36590 Query 193465 AAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTA 193524 || ||| ||||||||||| || |||||||||| ||| ||| || | | |||||||| Sbjct 36589 GAGATGGTGGTTTAAGATTAGGTGAAATGGAAAGAGATTGTGTTATTGCATATGGTGCTT 36530 Query 193525 CTCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTG 193582 | ||||| ||| |||||| | | | | |||||| | ||| | || ||| |||| Sbjct 36529 CACAATTGTTATTGGAAAGATTAATGATTTCATCTGATGCATTTGATGTTGATATTTG 36472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628528340183040