Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq292 192 1e-43 seq275 181 2e-40 seq326 179 7e-40 seq102 91.5 3e-13 >seq292 Length=16354 Score = 192 bits (212), Expect = 1e-43 Identities = 186/238 (78%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 82573 TTTATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATAT 82632 ||| | ||| ||| ||||| || | | ||||| || | || |||||||| || || | Sbjct 6384 TTTTTTACC-ACCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGT 6442 Query 82633 TATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTT 82692 |||||||||||| | ||||||| ||||||| |||||| ||||||||||||| | ||||| Sbjct 6443 TATAATCAGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTT 6502 Query 82693 GATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCAT 82752 |||| || || || ||||| ||||||||||| |||| ||| ||||| ||||| |||||| Sbjct 6503 GATCAGGTGGAATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAG 6562 Query 82753 TAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||| ||||| || || || || || ||||| || || || ||||| || ||||| Sbjct 6563 AAGATTCAACTTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCAT 6620 >seq275 Length=119121 Score = 181 bits (200), Expect = 2e-40 Identities = 172/220 (78%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | || ||| || || | ||| |||||||| || || || ||||||| Sbjct 71137 TACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAG 71196 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | ||||||| ||||||| |||||| ||||||||||||| | ||||||||| || | Sbjct 71197 ATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTG 71256 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || |||||||| |||| ||| ||||| ||||| |||||| || ||| | Sbjct 71257 GAATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAA 71316 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 |||| || || || ||||| || || || || || || || Sbjct 71317 CTTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 >seq326 Length=266662 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || || || || | || |||||||| || ||||| ||||||| Sbjct 240014 TACCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAG 240073 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||||||||||||||| |||||| |||||||| || | | ||||||||| || | Sbjct 240074 ATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTG 240133 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| |||||||| |||| ||| ||||| ||||| || || || ||| | Sbjct 240134 GAATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAA 240193 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| ||||| || || || || ||||| || || || || || ||||| Sbjct 240194 CTTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | | ||| || || | || |||||||| || || || || || | Sbjct 239558 TACCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTG 239617 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||||||||||||||| |||||| ||||| || |||| | |||||||||||| | Sbjct 239618 ATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTG 239677 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| |||||||| || |||| ||| || || ||||| ||||| || ||| | Sbjct 239678 GAATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAA 239737 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| ||||| || || || ||||| || || || || || || ||||| Sbjct 239738 CTTCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 120 bits (132), Expect = 6e-22 Identities = 144/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | | || || || | || |||||||| || || || || || | Sbjct 240242 TACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTG 240301 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | | ||| ||||||| |||||| |||||||| || | | |||||||||||| | Sbjct 240302 ATAAAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTG 240361 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| |||||||||||||| | ||| || || ||||| || ||| || ||| | Sbjct 240362 GGATCCCTTCTTTATCTTGAATCTTGGATTTGACGTTATCAATAGTGTCAGAAGATTCAA 240421 Query 82762 C---TTCCAAAGTTA 82773 | || ||| |||| Sbjct 240422 CCTATTTCAATGTTA 240436 >seq102 Length=19803 Score = 91.5 bits (100), Expect = 3e-13 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 143973 aaaaaaaTACCCGATCCAGTCTTGCATATAGAACTTAGGAGATGGGCTGATGT--TTTTA 144030 |||||||| |||||||| || |||| |||| | || |||||||||||| | | ||| Sbjct 7758 AAAAAAATGGGAGATCCAGTTTTACATACAGAATTAAGAAGATGGGCTGATATAATGTTA 7699 Query 144031 TTATAGCGCCCTTAACAGCAAATACGTTAGCAAAAATAGCCAATGGTATATGCGATAATT 144090 | ||| || |||| |||||||| ||||||||||| | |||||||| || ||||||| Sbjct 7698 AT-TAGT-CCTTTAAGTGCAAATACTTTAGCAAAAATTTCGAATGGTATTTGTGATAATT 7641 Query 144091 TACTAACATCTATAGTAAGAGCCTGG 144116 || | || |||| | ||| |||| Sbjct 7640 TATTGACTGCTATCATTAGAAGCTGG 7615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981822621003396