Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq277 241 3e-58 seq274 197 3e-45 seq185 168 2e-36 seq297 158 3e-33 seq358 156 1e-32 seq149 156 1e-32 seq221 120 7e-22 seq182 113 1e-19 seq364 98.7 2e-15 seq344 95.1 3e-14 >seq277 Length=184736 Score = 241 bits (266), Expect = 3e-58 Identities = 558/838 (67%), Gaps = 15/838 (2%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||||||||||||||||||| | ||| | | ||| | | | || |||| | || Sbjct 158923 ACTATTTTGGTTTCAAAACTTTAGAAAGATCATATCTTTTAAGAGTTGATGGTAAAGTCG 158982 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 |||| | |||||||| | | | | ||||| |||||||| ||||| |||||| Sbjct 158983 CTGAAAGACCTCAACATTTAATCATGAGAGTTGCTATTGGTATCCATGGTAGAGATATTG 159042 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT-----CATGCTAC 110476 || |||| ||||| |||| | | | | ||||| |||| |||||| | Sbjct 159043 AAAGTGTTGTTGAAACTTATAACTTGATGTCT-----GAAAGATATTTCACACATGCTTC 159097 Query 110477 TCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAG 110535 ||| || |||||||||| || ||| ||| || |||| || |||||| | | Sbjct 159098 TCCAACTTTATTTAACGCTGGTACTCCACATCCTCAAATGTCTTCATG-TTTCTTAGTTG 159156 Query 110536 GAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTT 110595 || | |||||||||||||| ||||||||||| || | ||| || ||| | |||| Sbjct 159157 CTATGCAAGATGATTCTATTGATGGTATTTATGAAACTTTAAAACAATGTGCCTTAATTT 159216 Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655 |||| | |||| || |||||| | || ||||| | ||| | || | || | | | Sbjct 159217 CTAAGACTGCTGGTGGTATTGGTTTACATATTCATAACATTAGATCTACTGGTTCTTACA 159276 Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715 | || | || ||| |||||| ||| | |||||||| | |||||||||||| ||| Sbjct 159277 TTGCTGGTACTAATGGTACTTCAAATGGTATCATTCCAATGGTTAGAGTCTTCAACAACA 159336 Query 110716 CTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCG 110772 |||| ||||| ||||||||||||| | || || | |||||| | || | | Sbjct 159337 CTGCTCGTTATGTTGATCAAGGTGGTAACAAAAGACCAGGTGCTTTTGCTTTATACTTAG 159396 Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832 |||| ||||| | ||||| ||||| ||| | || | | || ||||| || |||| Sbjct 159397 AACCATGGCACGCGGATATTTTTGATTTCATCGATATCAGAAAGAATCATGGTAAAGAAG 159456 Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892 || ||||| ||||||||||| ||| | ||||| |||||||||||||||||| | | Sbjct 159457 AAATCAGAGCTCGTGATTTATTCCCTGCTTTATGGATCTCAGATTTATTCATGAAAAGAG 159516 Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952 || || ||||| ||| | | | | ||| || |||| ||| || ||| Sbjct 159517 TTGAAAGCAATGGTGAATGGACATTATTCTCTCCAAATGAAGCTCCAGGTTTAGATGAAA 159576 Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCA 111012 ||||| | || |||||||| | || ||| |||||||||||||| | | | Sbjct 159577 CTTATGGTGATGAATTTGAAGAATTATATGAACGTTATGAAAAAGAAGGTCGTGGTAGAA 159636 Query 111013 AACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAA 111072 | || ||||||| || | |||| ||| | ||| | ||| ||||||||| | Sbjct 159637 AGACTGTTAAAGCTCAAAAATTATGGTATGCTATCTTGGAAGCTCAAACTGAAACTGGTA 159696 Query 111073 CTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130 |||| || || | || |||||| | ||| ||| ||||||||| ||| || || Sbjct 159697 CTCCATACATGCTTTACAAAGATGCTTGTAACAAGAAAACTAATCAAAAGAACTTGGG 159754 >seq274 Length=58465 Score = 197 bits (218), Expect = 3e-45 Identities = 475/706 (67%), Gaps = 21/706 (3%) Strand=Plus/Minus Query 110466 ATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGG-CTTCTTG 110524 |||||||| | || || |||||||| |||| || | | | | ||| |||| || Sbjct 27623 ATTCATGCATCACCAACATTATTTAACTCAGGTAC-ACCGAATGCTTATTTATCTTCATG 27565 Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584 || ||| | || ||| | || ||||| || || |||||||||| | || | | Sbjct 27564 TTTCCTTTTGGGTATTGATGAAGATTCCATAGATGGTATTTATGGTACTTTACATCGTTG 27505 Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGT-TCATGATATTCGCTCAA 110643 ||| | ||||||||| | || || ||||| ||||| || ||| ||||| | || Sbjct 27504 TGCATTAATTTCTAAAGCTGCAGGTGGGATTGGAATTCATGTATCAA-ATATTAGATCTT 27446 Query 110644 AAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAG 110703 ||| || |||| || | || ||| | || | ||| ||||| || ||| | || | Sbjct 27445 CAGGTTCATATATTGCGGGGACAAATGGTACATCTAATGGTCTTGTGCCGATGCTTAGGG 27386 Query 110704 TCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTG 110760 | | || | ||||||| |||||| ||||||||||||| | || ||| | |||| Sbjct 27385 TTTATAATAATACTGCAAGATATGTTGATCAAGGTGGTAATAAAAGACCTGGTGCTTTTG 27326 Query 110761 CTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATC 110820 | | ||| | ||||| |||||| |||||||||||||| ||||| | | || |||| Sbjct 27325 CAGTTTATGTTGAACCATGGCATAGTGATATATTTGAATTTTTAGATTTAAGGAAGAATC 27266 Query 110821 AAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTAT 110880 | ||| || ||| |||||| | ||||||||||||||| | ||||| | ||||||| Sbjct 27265 ATGGAAAGGAGGAAATGAGAGCAAGAGATTTATTTTATGCACTTTGGATACCTGATTTAT 27206 Query 110881 TCATGAAACGTGTTCAAGAAAATGGCATG--TGGTCTCTTATGTGTCCTCATCGTTCTCC 110938 | |||||| |||| ||||| ||| ||| ||| | | | | || || || Sbjct 27205 TTATGAAAGCTGTTAAAGAAGATG--ATGATTGGCATTTATTTTCACCAAATGAAGCTAA 27148 Query 110939 TGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGA 110998 ||| | |||| || ||||| |||| |||||| | | || ||| | |||| ||||| Sbjct 27147 AGGTTTGACTGACGTTTATGGTGAAGATTTTGAAAAATTATATGAACAGTATGTTAAAGA 27088 Query 110999 AGGCAAGTTTCGCAA--ACAAATTCCA--GCTCAAGAACTTTGGTTCAAAATCCTTGAAT 111054 || |||| || | | | | || || ||| || | |||| | ||| | |||| Sbjct 27087 AG----GTTTAGCCACGAGGACTGTCAAGGCACAAAAATTATGGTACGCTATCTTGGAAT 27032 Query 111055 CACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCT 111113 | ||| ||||||||| ||| | || |||||||||||| ||| |||| || | Sbjct 27031 CTCAAACTGAAACTGGTGGTCCATTCATGTTGTATAAAGATGCAT-GTAATATTAAGAGT 26973 Query 111114 AATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 ||||||| || || |||||||| || || ||||| || |||| Sbjct 26972 AATCAAAAAAACTTGGGAACAATAAAATCATCAAATTTATGTTGTG 26927 >seq185 Length=130276 Score = 168 bits (186), Expect = 2e-36 Identities = 496/758 (65%), Gaps = 15/758 (2%) Strand=Plus/Plus Query 131433 TATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCT 131492 |||| ||||||||| |||| || | | | ||||| ||| ||| || | || | Sbjct 110730 TATTCCCAATTAAATATCATGAAATCTGGCAAGCATATAAAAAAGCTGAAGCTTCATTTT 110789 Query 131493 GGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGG---GAAAAATTAACCT 131549 |||||| |||||| || ||| | | ||||||||| |||||||| |||| ||||| Sbjct 110790 GGACTGCTGAAGAAATTGATTTATCAAAAGATATTCATGATTGGAATGAAAGATTAAATG 110849 Query 131550 TGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCATTG 131609 |||||| ||| |||| | |||| | || ||||| || | ||||| |||| Sbjct 110850 ATAATGAACGTTTCTTTATTTCAAGAGTTTTAGCTTTCTTTGCTGCTTCAGATGGTATTG 110909 Query 131610 TTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTAACATCGT 131669 ||| ||||||| | ||| |||||| | ||| || | ||||| |||| | || | Sbjct 110910 TTAATGAAAATTTAGTTGAAAATTTCTCTGCTGAAGTTCAAATTCCAGAAGCTAAATGTT 110969 Query 131670 TCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGATTG 131729 | || || ||| | ||| ||||||| || | ||||||||||| |||| Sbjct 110970 TTTATGGTTTCCAAATTATGATGGAAAATATTCATTCAGAAACTTATTCATTATTAATTG 111029 Query 131730 AGAGTCTTGTTAAAAATG---AAGATGATAAAAATAAATTATTTGATGCTGTAAATAAAT 131786 | | | | ||||| || || | | | || || ||||| ||||| | | | Sbjct 111030 ATACTTATATTAAAGATCCAAAACAAGCTGAATAT---TTATTCAATGCTATTGAAACCA 111086 Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846 |||| |||||| | ||||| || |||||| | | ||||||| ||||| ||| Sbjct 111087 TTCCATGTATTAAAGAAAAAGCTGATTGGGCTTTAAGATGGATTGCTGATGAAGAAGCT- 111145 Query 131847 ATTTTTC--TACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGC 131904 || ||| | |||| | || ||||||||| |||||||||||| |||||||| ||| | Sbjct 111146 -TTATTCGGTGAAAGATTAGTTGCTTTTGCTGCTGTTGAAGGTATTTTCTTTTCTGGTTC 111204 Query 131905 TTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAA 131964 || | | || |||||| | || || | || || |||||||| | | || || || Sbjct 111205 ATTTGCTTCAATTTTTTGGTTGAAAAAAAGAGGTTTAATGCCTGGTTTAACTTTTTCAAA 111264 Query 131965 TCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGAAA 132024 | |||| || | | ||||||| || |||||||| |||||| ||| | | | | Sbjct 111265 TGAATTAATTTGTCGTGATGAAGGTTTACATACTGATTTTGCTTGTTTATTATTTGCTCA 111324 Query 132025 ATTTGCTGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTGATAT 132084 || |||||| |||| | | | || || || |||| | ||||| ||| || Sbjct 111325 TTTAAAAAATAAACCATCTGAAGAAATTGTTGAAAAAATTATTACTGAAGCTGTTTCAAT 111384 Query 132085 CGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATT-GGGATGAATGCTGACT 132143 || || | | | || || ||||| || || || ||| || ||||||||| | | Sbjct 111385 TGAATCTGAATATTTCACTGATGCTTTACC-AGCTTCTTTATTAGGTATGAATGCTAAAT 111443 Query 132144 CTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTA 132181 ||| | || |||| ||| ||||||||||||| Sbjct 111444 TAATGTGTCAATATGTTGAGTTCTGTGCTGATCGTTTA 111481 >seq297 Length=210129 Score = 158 bits (174), Expect = 3e-33 Identities = 473/723 (65%), Gaps = 36/723 (5%) Strand=Plus/Plus Query 167248 CACCAGCATTATCGAATTCATTCGCATAATTTGGTGCTGAAAATACAGTAACTAATTTAC 167307 |||| |||||||| |||||| ||||||||| || ||||||| |||||||||| | Sbjct 125300 CACCTGCATTATCAAATTCACCACAATAATTTGGAGCAGAAAATAATGTAACTAATTGTC 125359 Query 167308 GATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACGTATTACAAGTTCAA 167367 || |||| ||||||||||||||||||||||||| ||| || | ||||| || || Sbjct 125360 TTTTAGAAAAAAATTCATAACCATCTTCAACAACTTGATGAGCTC----TACAAATTAAA 125415 Query 167368 CTCCTAt--ttttttAAGAAAATTAGTTAAAGCACGTAA--TCCAAATTTATAACTACAA 167423 | ||| | |||| |||| | | ||| || | | |||||| || |||| | Sbjct 125416 TCCATATCATGTTTTTGTAAAAATCTTGAAACAACATCAGGACCAAATGTAAAACTTACA 125475 Query 167424 CCTCTTTCAGATTCAGAATAATAATCAATATCATGCGATGGATCCGCCCAAAGAAGATCG 167483 || | ||| |||| || | |||||| | ||||| | ||| | | ||| Sbjct 125476 CCACGATCATTTTCACTCCAACCAGTAATATCTTTATCAGGATCAGACCATAATAAATCA 125535 Query 167484 CATACCAACCCCTTATCAGGGATATCAATAGGTTTTTTAATCCTATTGATATCTTCTAAT 167543 |||| || || |||||| |||||| | ||| | ||| || | || | ||| | | Sbjct 125536 CATAATAAACCAACATCAGGTATATCAGTTGGTCTCATAACTCTTCTTATTTGTTCCATT 125595 Query 167544 TTATTAATATCTTCAGTGAT--TCCACCATGAACACAAAAAGCCAATGGATTATCAATTG 167601 ||| | ||| ||||| ||||||||| | ||| |||| || Sbjct 125596 GAATTTAAATC--AGGTGATAATCCACCATGCATTGTAAA--------GATT-----TTT 125640 Query 167602 TTATTCCAATGGTTGCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGA 167661 | || |||| | |||||||| | | | | |||| ||| | ||| ||||||| | Sbjct 125641 TCAT--CAATTATAGCAGCAATTGGTAAACAATTAAAACAATCAGTAAAAGTTTTCCAAA 125698 Query 167662 TTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAGATATCAG 167721 ||| || | ||||| ||| |||||||| ||||| ||||| ||| || || Sbjct 125699 GTTTAATATTATAACGTCTTTTACATTCATCATAAAATCCATAAATTCTATTAATTGAAG 125758 Query 167722 CACATTCGTGATTTCCTCTTAATAAAATTATGTTATTTNNNNNNNNNNNNNTGTAGCAAA 167781 ||||||| ||||| |||||||| | || | || | | | || | Sbjct 125759 CACATTCATGATTACCTCTTAAAATAAAGAAATTTTCTGGATATTTAATTTTATAAGCTA 125818 Query 167782 ATAATAACAAAATTGTTTCTAATGATTTAACACCTCTATCAACATAATCACCTAAAAATA 167841 ||||||| | || |||||||| |||| ||||||||| ||||||||||| | |||| Sbjct 125819 ATAATAAACATATAGTTTCTAAAGATTGTTTACCTCTATCCACATAATCACCAAGGAATA 125878 Query 167842 TATATTTATTTTGGTTTGAAGGATTATCTAGTTTTTTAAA-AATATTCAATAAATCACTA 167900 ||| |||| | || ||| | | | || ||| ||| || ||||||||| | Sbjct 125879 AATA---ATTTGATTCTGGAGGGAAACCACCATATTCAAATAATCTT-AATAAATCATAA 125934 Query 167901 AATTGACCATGTAAATCACCTACAACCTTTA--TGGGACTTGTAGTTTTAATTAGCATTG 167958 |||||||||||| |||||| |||| |||| ||| ||| || || ||| || |||| Sbjct 125935 TATTGACCATGTATATCACC-ACAAATTTTAATTGGAGCTTCTAATTCTAA-TAAAATTG 125992 Query 167959 GTT 167961 ||| Sbjct 125993 GTT 125995 >seq358 Length=257589 Score = 156 bits (172), Expect = 1e-32 Identities = 458/694 (66%), Gaps = 32/694 (5%) Strand=Plus/Plus Query 167239 TCATTACACCACCAGCATTATCGAATTCATTCGCA-TAATTTGGTGCTGAAAATACAGTA 167297 |||| || |||| |||||| ||||| | | || |||||||| || ||||||||| Sbjct 37592 TCATAACTGCACCCCAATTATCAAATTC-TCCACAATAATTTGGGGCACTAAATACAGTG 37650 Query 167298 ACTAATTTACGATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACGTATT 167357 |||||| ||||| ||| ||||||||||||||||||||||| ||| ||||| Sbjct 37651 ACTAATGAACGATCATTAAAAAATTCATAACCATCTTCAACAACCATATGAGCACGACAA 37710 Query 167358 ACAAGTTCAACTCCTAtttttttAAGAAAATTAGTTAAAGC-ACGTAATCCAAATTTATA 167416 ||||| |||| ||| | | ||| | ||| ||| ||| ||| || | || ||| ||| Sbjct 37711 ACAAGATCAAATCCAAATCTTTGTAAAAATTTATTTATAGCAACTTTAT-TAAAACAATA 37769 Query 167417 ACTACAACCTCTTTC---AGATTCAGAATAATAATCAATATCATGCGATGGATCCGCCCA 167473 | ||||| ||| | ||| | | || | ||| ||| | |||||| | ||| Sbjct 37770 TGAAACACCTCGTTCATTATCTTCCCATTCAT--TTAAT-GCATCTGTTGGATCTGACCA 37826 Query 167474 AAGAAGATCGCATACCAACCCCTTATCAGGGATATCAATAGGTTTTTTAATCCTATTGAT 167533 | | ||| | || || ||| || | |||| | ||| | |||| | | || Sbjct 37827 TAATAAATCATTAATTAAACCAAAATCTGGAACATCAGTTGGTCTATTAACATTTCTAAT 37886 Query 167534 ATCTTCTAATTTATTAATATCTTCAGTGATTCCACCATGAACACAAAAAGCCAATGGATT 167593 || || | | ||| | | || | | ||||||||||||||||||| ||| Sbjct 37887 TTCATCCATTGAATTTAAAACTGGTGAAAGTCCACCATGAACACAAAAA--------ATT 37938 Query 167594 ATCAATTGTTATTCCAATGGTTGCAGC-AATAGACATAGTGTCAAAAACATCGATGAAAC 167652 | | || | ||| ||||||| ||| | || || | |||| ||| || || Sbjct 37939 -TTACCTGCCA---CAA---TTGCAGCTAATGGTAAT-GTATTAAAAGTATCAATAAATA 37990 Query 167653 TTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTG 167712 |||||| |||| || ||| ||||| |||||||| ||||| ||||| |||||| Sbjct 37991 ATTTCCAAGTTTTAATATTTGAACGACGTTTACATTCATCATAAAATCCATAAACTCTTG 38050 Query 167713 AGATATCAGCACATTCGTGATTTCCTCTTAATAAAATTATGTTATTTNNNNNNNNNNNNN 167772 | || |||||||| ||||| |||||||| | | | || | | Sbjct 38051 TAACATTTGCACATTCATGATTACCTCTTAAAAGGAAAAAATTTTCTGGATATTTAATTT 38110 Query 167773 TGTAGCAAAATAATAACAAAATTGTTTCTAATGATTTAACACCTCTATCAACATAATCAC 167832 | || || |||||||| || || ||||| | ||||| |||||||||||||||||||| Sbjct 38111 TATAACATAATAATAATAATATAGTTTCAAGTGATTGTTTACCTCTATCAACATAATCAC 38170 Query 167833 CTAAAAATATATATTTATTTTGGTTTGAAGGATTATCTA-GTTTTTTAAAAATATTCAAT 167891 ||||||||| ||| | || | | ||| | | | ||| |||| || | | | Sbjct 38171 CTAAAAATAAATAAT--TTGCAGCAGGTGGGA--ACCCACATTTGGTAAACATTCTAATT 38226 Query 167892 AAATCACTAAATTGACCATGTAAATCACCTACAA 167925 ||||||| |||||||||||| | |||||| |||| Sbjct 38227 AAATCACCAAATTGACCATGAACATCACCAACAA 38260 >seq149 Length=94428 Score = 156 bits (172), Expect = 1e-32 Identities = 489/740 (66%), Gaps = 50/740 (7%) Strand=Plus/Minus Query 167202 AATATTTCAAAAGAGCACCTAA-AATCT-TTATTAATTATCATTACACCACCAGCATTAT 167259 |||| ||||||| || ||| |||| |||| || |||| ||| |||| ||||| Sbjct 12365 AATAGTTCAAAACTACA--TAATAATCCATTATCAACACTCATCACAGCACCCCAATTAT 12308 Query 167260 CGAATTCATTCGCA-TAATTTGGTGCTGAAAATACAGTAACTAATTTACGATTGAAAAAT 167318 ||||| | | || ||||||||||| ||||| ||||||||||| || ||| Sbjct 12307 TAAATTC-TCCACAATAATTTGGTGCACTAAATATTGTAACTAATTTTTTTTTAGCAAAA 12249 Query 167319 AATTCATAACCATCTTCAACAACTTCATGGGCACGTATTACAAGTTCAACTCCTAttttt 167378 ||||||||||||||||||||||| ||| | | || | | |||| | | |||| Sbjct 12248 AATTCATAACCATCTTCAACAACCATATGACCTCTAATAATTAAATCAAATTTAAATTTT 12189 Query 167379 ttAAGAAAATTAGTTAAAGCACGTAAT--CCAAATTTATA----ACTACAACCTCTTTCA 167432 ||| |||||| || | || | | ||||| ||| ||| || || || Sbjct 12188 TTACAAAAATT--TTCCACAACTTTTTTACCAAAACAATATGAAACTCCACGATCATTAT 12131 Query 167433 GATTCAGAATAATAATCAATATCATGCGATGGATCCGCCCAAAGAAGATC-GCATACCAA 167491 |||| || | | || | | |||||| | ||| | | ||| ||| | | Sbjct 12130 CATTCC--ATTCTGTTACATTTGGATC--TGGATCTGACCATAATAAATCTGCAAATAAT 12075 Query 167492 CCCCTTATCAGGGATATCAATAGGTTTTTTAATCCTATTGATATCTTCTAATTTATTAAT 167551 || || ||||| ||||| | ||| |||| | | | || | || ||| ||||| | Sbjct 12074 CCAGTT-TCAGGAATATCTGTTGGTCTTTTTAAATTTTCAATTTGTTTTAAATTATTTAA 12016 Query 167552 ATCTTCAGTGAT--TCCACCATGAACACAAAAAGCCAATGGATTATCAATTGTTATTCCA 167609 || | ||||| ||||||||||| ||||||| ||| || | ||| | Sbjct 12015 ATTTG--GTGATAATCCACCATGAATACAAAAA--------ATT-----TTATCATT--A 11973 Query 167610 ATGGTTGCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATTTTTA-- 167667 || |||||| ||| | | ||| | |||||||| || ||| ||||||| |||||| Sbjct 11972 ATTATTGCAGAAATTGGTAAAGTATTGAAAACATCAATAAAATTTTTCCAAGTTTTTAAA 11913 Query 167668 TCGAACCACGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAGATATCAGCACATT 167727 | || | || ||| |||||||| ||||| ||||| | | | |||| ||| ||| Sbjct 11912 TTTAATCT--TCTTTTACATTCATCATAAAACCCATAAATTTTGGTAATATTTGCAGATT 11855 Query 167728 CGTGATTTCCTCTTAATAAAATTATGTTATTTNNNNNNNNNNNNNTGTAGCAAAATAATA 167787 | |||||||||| ||| | || | || | | || | |||||||||| Sbjct 11854 CATGATTTCCTCGTAACATAAAGAAATTTTCTGGATATTTTATCTTGAAACAAAATAATA 11795 Query 167788 ACAAAATTGTTTCTAATGATTTAACACCTCTATCAACATAATCACCTAAAAATATATATT 167847 | || || ||||||||||||| |||||||||||||||||| || || |||| ||| Sbjct 11794 ATAATATAGTTTCTAATGATTGTTTACCTCTATCAACATAATCCCCCAAGAATAAATA-- 11737 Query 167848 TATTTTGGTTTGAAGGATTATCTAGT--TTTTTAAAAATATTCAATAAATCACTAAATTG 167905 |||| |||| || | ||| | | |||||||| | || ||||||||| ||||||| Sbjct 11736 -ATTTGAATTTGGTGG-TAATCCACTAAGTTTTAAAATTCTT-AATAAATCATTAAATTG 11680 Query 167906 ACCATGTAAATCACCTACAA 167925 ||||| | |||||| |||| Sbjct 11679 TCCATGAATATCACCAACAA 11660 >seq221 Length=23070 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||| | || |||||| ||||| |||||| | ||||| ||| | ||||||||||| Sbjct 6304 CATTTAATGGATAATGATCCTGTTCTTTTCAATCGTCAACCTTCATTACATAAAATGTCC 6245 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCT 305428 |||||||| ||| || ||||| | || | || ||| |||||||| || | | Sbjct 6244 ATGATGGCACATCGTGTTAAAGTTATGCCTTACTCAACTTTTAGATTAAATTTATCAGTT 6185 Query 305429 TGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 | | ||||||||||||||||| ||||| |||||||||||| | || || || ||||| Sbjct 6184 ACTTCACCTTATAATGCGGATTTCGATGGTGATGAAATGAATTTACACGTTCCACAATCT 6125 Query 305489 AAGGTTACAATGACTGAATTA 305509 | | |||| |||||||| Sbjct 6124 GAAGAAACAAGAGCTGAATTA 6104 Score = 107 bits (118), Expect = 5e-18 Identities = 191/272 (70%), Gaps = 10/272 (4%) Strand=Plus/Minus Query 304775 GAAGATGATTTGACATTAAAATACTCTGATATCATTAAATATAACAATTTAATTAAGAAA 304834 ||||||||||| || | |||| |||||||| || || ||| | ||||| ||| Sbjct 6832 GAAGATGATTTAACTTATAAATTATCTGATATTATGAAGGCTAATA--TTAATGTTCAAA 6775 Query 304835 AAGTTAACGAGCGATTCTAATTCACATTTGGTTATTGATTA--TTCAAACAAT-TTACAA 304891 || ||| | ||| | | |||| |||||| || | || || | | |||||| Sbjct 6774 AA-TTAGAAATGGATGGTTCTCCACAACATGTTATTAATGAGTTTGAATCTTTATTACAA 6716 Query 304892 TATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCATCTCAAA 304949 | |||| |||| || | ||||||||||| ||||| || || | || || | |||| Sbjct 6715 TTTCATGTTGCCACTTATATGGATAATGATATTGCAGGTCAACCA--CAAGCTTTACAAA 6658 Query 304950 GATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTATTC 305009 |||||| | ||| | || |||| | || | ||||||||||| ||||||||| Sbjct 6657 AATCTGGTCGTCCTATTAAATCTATTCGTGCTCGTCTAAAAGGTAAAGAAGGTCGTATTA 6598 Query 305010 GAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041 |||||||| ||||||| ||||||||||||||| Sbjct 6597 GAGGTAATTTAATGGGTAAACGTGTTGATTTT 6566 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 72175 CCAAACACAACGTGTTTGTTATTTAAATGTGGTTGAGGTGCAAGTGTAATGAAGAATTGC 72234 || || ||||| ||||| ||||||||| ||| ||| | |||||||| ||||| Sbjct 9262 CCGAAAACAACATGTTTACCATTTAAATGAGGTGTTGGTACTGTAGTAATGAAAAATTGT 9321 Query 72235 GAGTTATTTGAATCAGGACCCGAGTTAGCCATAGAAACCAAACCTGCTTCTGAATGCTTT 72294 || ||||| || ||||| | |||||||| || | || || || ||| | Sbjct 9322 GAACCATTTGTATTTGGACCAGCATTAGCCATTGATAATAAGAATGGTTTATCATGTACT 9381 Query 72295 AATAAGAAATTCTCATCTTCAAAAGTTTCTCCATATATACTTTGACCTGAGCTTCCATCA 72354 ||| |||||| ||||||||||| |||| ||||| || | ||| | |||| | Sbjct 9382 AATTTGAAATTTTCATCTTCAAATTTTTCACCATAAATTGATACACCACCAGTACCATTA 9441 Query 72355 AAGTTCACAATATCACCTCCTTGAACCATAAAATTATTAATTACTCTATGGAA 72407 || || |||||| ||||||| ||||||||| ||||||| | |||||| Sbjct 9442 TGATTTGTAAAATCACCACCTTGAAGCATAAAATTTTTAATTATACGATGGAA 9494 >seq182 Length=54856 Score = 113 bits (124), Expect = 1e-19 Identities = 335/501 (67%), Gaps = 22/501 (4%) Strand=Plus/Minus Query 279806 GAATTTATTGATAAAGAACTGATCCATTTTTCTAATTATGATGTTCATCGTTCTATTCCT 279865 ||||||||| |||| ||| | || ||||| | |||| | | | || ||||| Sbjct 36892 GAATTTATTAATAAGGAATTAATTTTATTTTCAATGGCTGATAATATTAGATCAATTCCA 36833 Query 279866 CATTTAATGGATGGTTTGAAACCT--TCACAGCGTAAGATTATATTCAGTTGTTTCAAAA 279923 | || ||||||| || ||||| ||| || || || ||| ||| ||||||| Sbjct 36832 TCTGTATTGGATGGGTTTAAACCAGGTCAAAGAAAAATCTTGTATG--GTTCTTTCAAAC 36775 Query 279924 GAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAG 279983 | || || | |||||| |||||||| ||||| |||||| ||||||||||| ||| Sbjct 36774 GTAATTTAAAATCTGAAATTAAAGTTGCTCAATTAGCTGGTTATATTTCAGAACATACAG 36715 Query 279984 GTTATCATCACGGTGAAGCGTCTCT--TCAAGGTGCTATTGTAGGTCTTGCCCAAGATTT 280041 |||||||||| |||||| ||| | ||| | | ||||| || | || |||||||| Sbjct 36714 GTTATCATCATGGTGAACAATCTTTAATCA--CTACAATTGTTGGGTTAGCACAAGATTT 36657 Query 280042 TATGGCTTCAAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTATTCA 280101 | | |||||| || | ||| | | | |||||| ||| || ||| | | | | Sbjct 36656 CGTTGGTTCAAATAATATTAATTTATTATTACCAAAAGGTTCTTTCGGTACAAGAAATAT 36597 Query 280102 CAATGGAAAAGAT-CATGGTAG-TGCTCGTTACATACATACATGTCTTTCAGAT---ATT 280156 ||| |||||| ||| || ||| | || || |||| || || || | || Sbjct 36596 GGGTGGTAAAGATGCAT--CAGCTGCGAGATATATTTATAC-TGAATT--AGCTACAATA 36542 Query 280157 ACAA-ACAAGTTATTTATCAATTCTGATAATGCTTCATTAGA-GTGGCTAGAGGATGATG 280214 |||| | || || | ||||| ||||| |||| || || | | | | ||||||| Sbjct 36541 ACAAGAAAAATTTTCAATCAA-ACTGATGATGC-TCTGTATACTTATGAACAAGATGATG 36484 Query 280215 GTCTTGCTATTGAACCAACATATTATGCTCCAATTATCCCTATGATTCTTGTTAATGGTG 280274 || | ||||||| |||| ||| ||||||||||| ||| | || |||||||||| Sbjct 36483 GTGAAAATGTTGAACCTACATGGTATTTACCAATTATCCCAATGGTGCTAGTTAATGGTG 36424 Query 280275 CTCAAGGAATTGGAACAGGTT 280295 || | || ||||| || |||| Sbjct 36423 CTGAGGGGATTGGTACTGGTT 36403 >seq364 Length=334480 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/192 (72%), Gaps = 9/192 (5%) Strand=Plus/Minus Query 305300 GTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCAT 305359 ||| || | ||| | || |||||||| ||| | | ||| | |||||| | | ||| Sbjct 163560 GTTTTCCGTCATATTAAAAACAATGATATTGTTATCATGAATCGTCAACCAACTTTACAT 163501 Query 305360 AAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGG---ATTGACATTTCGATTA 305416 ||| |||||||||| ||||||||||| ||| ||| | || | ||| || || ||| Sbjct 163500 AAAGCTTCTATGATGGGTCATAAAGTCAGAGTTTTACCAGGTGAAAAGACTTTACGTTTA 163441 Query 305417 AATGTAAGTGCTTGTACGC---CTTATAATGCGGATTTTGATGGAGATGAAATGAATATG 305473 || || |||| || |||||||||| ||||||||||| ||||||||||||||| Sbjct 163440 CAT-TA--TGCTAACACCAATGCTTATAATGCTGATTTTGATGGTGATGAAATGAATATG 163384 Query 305474 CATGTACCTCAA 305485 ||| | || ||| Sbjct 163383 CATTTCCCACAA 163372 >seq344 Length=31598 Score = 95.1 bits (104), Expect = 3e-14 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 305293 TGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATC 305352 |||| ||||| |||||||| | || ||| ||| | |||||||| ||||| || Sbjct 13248 TGATGTTGTTGAAAGACATTTAGAAGATGGTGACGTTGTTTTATTCAATAGACAACCTTC 13307 Query 305353 ACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCT-GGATTGACATTTC 305411 | | |||| | | || || | | ||| | | ||| | | || ||| || |||| Sbjct 13308 ATTACATAGATTATCAATTTTATCACATTATGCTAAAATCAGACCTTGGA--GAACTTTC 13365 Query 305412 -GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAAT 305470 ||||||||| | ||| |||||| || |||||||| ||||||||||| |||||||||||| Sbjct 13366 AGATTAAATGAATGTGTTTGTACACCATATAATGCTGATTTTGATGGTGATGAAATGAAT 13425 Query 305471 ATGCATGTACCTCAA 305485 | ||||| || ||| Sbjct 13426 TTACATGTTCCACAA 13440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186807265001804