Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq326 141 6e-29 seq292 123 2e-23 seq275 120 2e-22 >seq326 Length=266662 Score = 141 bits (156), Expect = 6e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || |||||||||| || |||||||| || |||||||| || Sbjct 240015 ACCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGA 240074 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| || |||||||| || |||||||||||||| || ||||| | || Sbjct 240075 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGG 240134 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| |||||| || || ||||| ||| | ||||| ||||| | Sbjct 240135 AATACCTTCCTTGTCTTGAATTTT-TGATTTAACATTGTCAATAGTGTCTGAAGATTCAA 240193 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| |||||||| || || ||||| || || || |||||| Sbjct 240194 CTTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCATA 240243 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||| |||||||||| || |||||||| |||||||| || || Sbjct 239559 ACCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGA 239618 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| || |||||||| || || ||||| ||||| || |||||| | || Sbjct 239619 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGG 239678 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||||| || || || | || | || ||| ||||| | Sbjct 239679 AATACCTTCTTTATCTTGGATTTT-TGATTTGACGTTATCAATAGTATCGGAAGATTCAA 239737 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||||||||| ||||| || || || |||||| Sbjct 239738 CTTCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCATA 239787 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | ||| |||||||||| || |||||||| |||||||| || || Sbjct 239787 ACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGA 239846 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || || |||||||| || || ||||||||||| || ||||| | || Sbjct 239847 TAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGG 239906 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| |||||| | || ||| | || | |||||| |||||| | Sbjct 239907 AATACCTTCTTTGTCTTGAATTTT-GGATTTAACGTTATCGATGGTGTCTGATGATTCAA 239965 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| || || ||||| || || || |||||| Sbjct 239966 CTTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATA 240015 Score = 109 bits (120), Expect = 4e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 33520 TCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCG 33579 ||||||||||| || | | |||||||| | || |||||||| || |||||||| Sbjct 239329 TCACCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCA 239388 Query 33580 GAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGC 33639 || | || | | || || |||||||| || || ||||| ||||| || || || | Sbjct 239389 GATAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGT 239448 Query 33640 GGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTC 33698 || | ||||||||| || ||||| || || ||||| ||| | || || ||||| Sbjct 239449 GGAATACCTTCTTTATCTTGGATTTT-TGATTTAACATTGTCAATAGTATCTGAAGATTC 239507 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| |||||||| || || || || |||||||| |||||| Sbjct 239508 AACTTCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCATA 239559 Score = 100 bits (110), Expect = 2e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | ||| |||||||||| || |||||||| |||||||| || || Sbjct 240243 ACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGA 240302 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || || |||||||| || |||||||||||||| || |||||| | || Sbjct 240303 TAAAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGG 240362 Query 33642 CACACCTTCTTTGTC 33656 | |||||||| || Sbjct 240363 GATCCCTTCTTTATC 240377 >seq292 Length=16354 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||| || | ||| || ||||||| || |||||||| ||||| ||||| | Sbjct 6392 CACCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAG 6451 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || || |||||||| || ||||| || ||||| || ||||| | | Sbjct 6452 ATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTG 6511 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCC 33699 | | ||||||||| || |||||| || || |||| |||| || || ||||| Sbjct 6512 GAATACCTTCTTTATCTTGAATTTT-TGATTTGACATTGTCAATAGTATCAGAAGATTCA 6570 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || |||||||||||||| ||||| ||||| || ||||| Sbjct 6571 ACTTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCAT 6620 >seq275 Length=119121 Score = 120 bits (132), Expect = 2e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | || |||||||||| ||| |||||||| ||||||||||| || Sbjct 71138 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGA 71197 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || || |||||||| || ||||| || ||||| || ||||| | || Sbjct 71198 TAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGG 71257 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| |||||| || || |||| ||| | ||| || ||||| | Sbjct 71258 AATACCTTCTTTGTCTTGAATTTT-TGATTTGACATTGTCAATGGTATCAGAAGATTCAA 71316 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | || | || || || ||||| ||||| ||||| || || Sbjct 71317 CTTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702541786880