Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq292 138 1e-27 seq326 132 4e-26 seq275 105 6e-18 >seq292 Length=16354 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| |||||| | ||||| ||||| ||||| || ||| | || || | ||||| ||| | Sbjct 6624 CAAGATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATC 6565 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 |||||||| || | || ||| ||||||| |||||||| ||||| || || || Sbjct 6564 TTCTGATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTGA 6505 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||| ||| | | || | | || |||||| | ||||||| ||||| | | ||||| Sbjct 6504 TCAACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTA 6445 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || |||||||||||||| || | |||||||| |||||||| ||||| || Sbjct 6444 TAACATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATTAAGAGGTGG 6394 >seq326 Length=266662 Score = 132 bits (146), Expect = 4e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| ||||| || ||| | || || | ||||| ||| | | Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || ||| |||||| |||||||| ||||| || || ||||| Sbjct 239726 GATACTATTGATAACGTCAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAA 239667 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 ||| | | |||| || || |||||| | ||||| | ||||| | |||| | |||| Sbjct 239666 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAG--ACTACA 239609 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | |||||||||||||| || | ||||| || |||||||||||||| || Sbjct 239608 ACATTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGG 239560 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || || || || ||| | ||||| | ||||| ||| | Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || ||| |||||| |||||||| ||||| || || || || Sbjct 239498 GATACTATTGACAATGTTAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACCAA 239439 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | |||| || || |||||| | ||||||| ||||| | ||||||||| Sbjct 239438 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACAAT 239379 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||||| || | ||||| || | ||||| ||||| || Sbjct 239378 ATTCAAAAAGAATCAACATTGCATTTGGTCCTTAGATTAAGAGGTGG 239332 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| || || || ||| | ||||| | ||||| ||| | Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || ||| ||||||| || || || ||||| || || ||||| Sbjct 240182 GACACTATTGACAATGTTAAATCAAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 240123 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | |||| | || |||||| | ||||| | ||||| | ||||||||| Sbjct 240122 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAAT 240063 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||||||||| || | ||||| || || ||||||||||| || Sbjct 240062 ATCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGG 240016 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| || || || || | || || | ||||| ||| | Sbjct 240014 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA 239955 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || ||| |||||| || ||||| ||||| || || ||||| Sbjct 239954 GACACCATCGATAACGTTAAATCCAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAA 239895 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | |||| || || |||||| | ||||||| | | | | | || ||||| Sbjct 239894 CAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAAC 239835 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||||| || | ||||| || |||||||| ||||| || Sbjct 239834 ATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGGTGG 239788 >seq275 Length=119121 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 || || ||||| ||||| || || | || || | ||||| ||| | ||||| || Sbjct 71356 TTCGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCATT 71297 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || | || ||| ||||||| || ||||| ||||| || || ||||| ||| | | Sbjct 71296 GACAATGTCAAATCAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGTTTA 71237 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAA 25363 || | | || |||||| | ||||||| ||||| | | |||||||| ||||||||| Sbjct 71236 ATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAAAAA 71177 Query 25364 GAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || | ||||| || || ||||| ||||| || Sbjct 71176 GAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGG 71139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092374820480