Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq185 316 2e-81 seq154 210 2e-49 seq291 159 3e-34 seq277 86.0 5e-12 seq159 84.2 2e-11 >seq185 Length=130276 Score = 316 bits (350), Expect = 2e-81 Identities = 611/887 (69%), Gaps = 27/887 (3%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| | || |||||| |||||||||| || |||||| || |||||||| | || Sbjct 110723 TTTGTTTTATTCCCAATTAAATATCATGAAATCTGGCAAGCATATAAAAAAGCTGAAGCT 110782 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTA 43819 ||||||||||| || |||||| ||||||| | ||||| | |||||| || | | Sbjct 110783 TCATTTTGGACTGCTGAAGAAATTGATTTATCAAAAGATATTCATGATTGGAATGAAAGA 110842 Query 43820 --AAACCACAAGAAAAACAT-TTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGAC 43876 ||| | || || | ||||| || ||||| || || |||||||| || Sbjct 110843 TTAAATGATAATGAACGTTTCTTTATTTCAAGAGTTTTAGCTTTCTTTGCTGCTTCAGAT 110902 Query 43877 GGGATAGTCAATGAAAATTTGGTT---AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAA 43933 || || || ||||||||||| ||| | | | ||| ||||||||| | |||||| Sbjct 110903 GGTATTGTTAATGAAAATTTAGTTGAAAATTTCTCTGCT---GAAGTTCAAATTCCAGAA 110959 Query 43934 GCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA--CA 43991 || |||||||||||| || |||||| || |||||||||||||| |||| || || Sbjct 110960 GCTAAATGTTTTTATGGTTTCCAAATTATGATGGAAAATATTCATTCAGAAACTTATTCA 111019 Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGC 44049 | || || ||||| || || |||||| || | |||| | || || ||||| Sbjct 111020 TTATTA--ATTGATACTTATATTAAAGATC--CAAAACAAGCTGAATATTTATTCAATGC 111075 Query 44050 GATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT-- 44107 || ||||| | || |||||| | ||||| || ||||| | | |||||| | Sbjct 111076 TATTGAAACCATTCCATGTATTAAAGAAAAAGCTGATTGGGCTTTAAGATGGATTGCTGA 111135 Query 44108 TCAA-ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT 44166 | || | | || || || ||| || | || || ||||| | ||| ||||| |||||||| Sbjct 111136 TGAAGAAGCTTTATTCGGTGAAAGATTAGTTGCTTTTGCTGCTGTTGAAGGTATTTTCTT 111195 Query 44167 TTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGAC 44226 ||| || || ||||| | || |||||||| || ||| ||||||| |||||||| || || Sbjct 111196 TTCTGGTTCATTTGCTTCAATTTTTTGGTTGAAAAAAAGAGGTTTAATGCCTGGTTTAAC 111255 Query 44227 GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286 ||||||||||| ||||| ||||||||||||| |||||| ||||||||||| || || Sbjct 111256 TTTTTCAAATGAATTAATTTGTCGTGATGAAGGTTTACATACTGATTTTGCTTGTTTATT 111315 Query 44287 ACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACA--ATTACAGATATTGTTGTA 44344 | ||| || | | | |||| || || || |||| | || | | ||| || Sbjct 111316 ATTTGCTCATTT---AAAAAATAAACCATC-TG-AAGAAATTGTTGAAAAAATTATTACT 111370 Query 44345 GAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGA 44404 || || || || ||| |||| | | || || ||||| | |||| |||| Sbjct 111371 GAAGCTGTTTCAATTGAATCTGAATATTTCACTGATGCTTTACCAGCTTCTTTATTAGGT 111430 Query 44405 ATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAA 44464 ||||||| || ||| |||||| |||| | | ||| ||||||||| | | | Sbjct 111431 ATGAATGCTAAATTAATGTGTCAATATGTTGAGTTCTGTGCTGATCGTTTATTAGTTGCT 111490 Query 44465 CTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCG 44524 | ||| | ||| ||||| ||| ||| || ||||||||||||||||| ||||| Sbjct 111491 TTAGGTAATAAAAAATTCTATAATGTTACAAATCCATTTGATTTTATGGAAAACATTTCA 111550 Query 44525 TTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571 || | || ||||| || || ||||||||| | ||| ||| ||||| Sbjct 111551 TTAGCTGGTAAAACTAATTTCTTTGAAAAAAGAGTTTCAGATTATCA 111597 >seq154 Length=93191 Score = 210 bits (232), Expect = 2e-49 Identities = 406/598 (68%), Gaps = 12/598 (2%) Strand=Plus/Plus Query 19244 TTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTTT 19303 |||| || || |||||| ||| | |||| ||| | ||||| |||| || ||| ||| Sbjct 39961 TTGGTGGGTTAGATAAAGAATTTACACAAATTTTTAGAAGAGCTTTTGCATCACGTATTT 40020 Query 19304 TTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTATG 19363 | | | || ||| || |||| || || |||||| || | || | | || Sbjct 40021 TCCCACCTTCAGTTATTCAAAAATTAGGTATTAGTCATGTTAAAGGTTTATTATTATTTG 40080 Query 19364 GGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---CAA 19420 | ||||| ||| ||| ||||| |||||||| ||| | || ||| | | | | ||| Sbjct 40081 GTCCACCAGGTACTGGTAAAACTTTAATTGCAAGAAGAATTGGTACAATGTTGAATGCAA 40140 Query 19421 AACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGG 19480 || |||| |||||||| |||||||| ||||| |||| ||||||||| ||| ||| | Sbjct 40141 AAGAACCA---AAAATTGTTAATGGTCCAGAAATTTTAAGTAAATATGTTGGTTCATCTG 40197 Query 19481 AAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCA 19540 |||||||| | || ||| ||| || ||||||| ||| | ||| ||| Sbjct 40198 AAGAAAATATTCGTAATTTATTTAAAGATGCTGAAGCTGAATATAAATCAAAAGGAGAAG 40257 Query 19541 AAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT 19600 || ||| || || ||||| || | |||||||| || | | | || |||||||||| Sbjct 40258 AATCTTCATTACATATTATCATTTTTGATGAATTAGATTCTGTTTTCAAACAAAGAGGTT 40317 Query 19601 C------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAG 19654 | || || | ||| || ||| | ||||||||||||| | | | ||| | | Sbjct 40318 CAAGAGGTGATGGTACTGGTGTTGGTGATAATGTTGTCAATCAATTATTAGCCAAAATGG 40377 Query 19655 ACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAA 19714 | |||||| | ||| |||||||||| ||||||||||| ||||| ||| | | || |||| Sbjct 40378 ATGGTGTTGATCAATTGAATAATATCTTAGTTATTGGTATGACAAATCGTCGTGATTTAA 40437 Query 19715 TAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCG 19774 | || | || |||||| |||| ||| | || ||| | | | |||||| | ||||| | Sbjct 40438 TTGATAATGCTTTATTAAGACCTGGTAGATTTGAAGTTCAAGTTGAAATTCAATTACCAG 40497 Query 19775 ATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAA 19832 ||||| ||| ||| | ||||||| | || || || || ||| | ||||||| Sbjct 40498 ATGAAGATGGTCGTTTACAAATTTTTGAAATTCAAACCAAAAAAATGAAAGAAAATAA 40555 >seq291 Length=72889 Score = 159 bits (176), Expect = 3e-34 Identities = 441/672 (66%), Gaps = 23/672 (3%) Strand=Plus/Plus Query 40702 TAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGGTTTATCAAAG 40761 ||||||| |||||| | || || || || | |||| | | |||||||| ||| Sbjct 10497 TAACTACCAAAAAAGTCTTCACAAAGGGTATCATATTAGAATTACTTTGGTTTATTCAAG 10556 Query 40762 GTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAATGCGCAC---A 40818 ||||||| ||| ||| |||||| |||| ||| || | |||||| | | | | Sbjct 10557 GTTGTACAGATGGTAAAAAATTAAGTGAAAAAGGTGTTAAAATTTGGGAAGGTAATGGAA 10616 Query 40819 GTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTC 40878 || | || | ||| || |||| ||| ||||| |||||||||| | |||| Sbjct 10617 GTCGTGAA---TTTTTAGATAAATTAGGTTTAACTGATAGACGTGAAGGTGATTTAGGTC 10673 Query 40879 CTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGTACT-CTGAT 40937 | ||||||||||| || | | ||||||| || || |||||| || ||| | ||||| Sbjct 10674 CAGTTTATGGATTCCAATGGAGACATTTCGGTGCTAAATAT-ACTGATTGTGATGCTGAT 10732 Query 40938 TATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGATTAAATCCGATCCC 40997 ||| | | |||| | ||||||||| ||||| ||| | ||| | |||| Sbjct 10733 TATTCAGGTCAAGGTGTTGATCAATTAGCTGAAGTTATTCATAAATTGAAAACAAATCCT 10792 Query 40998 GATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTG 41057 || || ||||| ||| ||| || ||||| ||| | || | | | |||||||| Sbjct 10793 TATGATCGTCGTATTATAATGTCTGCATGGAATCCACCAGATTTCCCAATTATGGCATTA 10852 Query 41058 CCACCTTGTCATTTGTTATGTCAGTTTTACGTT--------TGCA-ATGGTGAAC----- 41103 ||||| |||||| | || | || ||||| ||| | | | ||| ||| Sbjct 10853 CCACCATGTCATGTTTTTTCACAATTTTATGTTAATTTTCCTAAAGAAGGTAAACCACAA 10912 Query 41104 -TGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162 | |||||| ||| ||||||||||| | || ||||| || || || || ||||| || Sbjct 10913 TTATCATGTTTATTATATCAAAGATCTTGCGATATGGGTCTTGGAGTTCCTTTTAATATT 10972 Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAA 41222 || ||||||| | | || | ||||||||| | ||| || | | ||||||| Sbjct 10973 GCTTCTTATGCTTTATTAACTAAAATGATTGCAAAAGTTGTTGATATGGATTGTGGTGAA 11032 Query 41223 TTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAA 41282 ||| | || || | || ||| ||| |||| | |||| | || | |||| |||| Sbjct 11033 TTTATACATACTATGGGTGATTCTCATGTTTATAAAGATCATGTTGATGCTTTAAAAGAA 11092 Query 41283 CAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAAC 41342 ||| | ||| || ||||| ||| |||| || |||||||| | | | || || | Sbjct 11093 CAAATTACAAGAGAACCTTATGAATTCCCAAAATTAATTATTAAAAGAGATATTAAAGAT 11152 Query 41343 ATTGATGATTTT 41354 |||||||||||| Sbjct 11153 ATTGATGATTTT 11164 >seq277 Length=184736 Score = 86.0 bits (94), Expect = 5e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 115035 GTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTCGGCT 115094 ||||||||||| |||| |||||| ||||||||||| || ||||| || | || || | Sbjct 37413 GTCATACGTGATGGAATAGCATGAGGATTAATAATTAAATCTGGGACAATACCTTCTCTT 37472 Query 115095 GTGAACGGCATGTCGTGCTGATCGTACATCATTCCACAAGTTCCTTTTTGAGCGGTAAAC 115154 ||||| ||||| || | || || | || ||| ||| ||||||||| | | Sbjct 37473 GTGAAAGGCATATCTTCACGACGATATGTAATACCAATAGTACCTTTTTGACCATGACGT 37532 Query 115155 GATGCAAATTTATCACCAAT 115174 || ||||||||||||||||| Sbjct 37533 GAGGCAAATTTATCACCAAT 37552 >seq159 Length=90283 Score = 84.2 bits (92), Expect = 2e-11 Identities = 245/371 (66%), Gaps = 6/371 (2%) Strand=Plus/Minus Query 47228 TTAGGACTTTATGAAA-AATCAGGGAAAAT-ATTATTTCTCGGGTTAGACAATGCAGGAA 47285 ||||| |||||| || || || | |||| ||||||| | || ||||| |||||||| | Sbjct 76002 TTAGG--TTTATGGAATAAACATGCCAAATTATTATTTTTAGGTTTAGATAATGCAGGTA 75945 Query 47286 AAACGGCATTACTCCACATGCTCAAATACAATTGCATGAAAGAGCATA-ACCCTACATTA 47344 |||| | ||| | || ||| | ||| | || | || | | || | || || ||| Sbjct 75944 AAACTACTTTATTACATATGTTAAAAAATGATAG-ATTAGCTACTTTACAACCAACTTTA 75886 Query 47345 CATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCACATTTGATTTAGGA 47404 ||||| || || ||| || || || ||| | | | ||| | ||||||||||||||| Sbjct 75885 CATCCAACTTCAGAAGAATTAGCAGTTGGTACTGTTAGATTCACCACATTTGATTTAGGT 75826 Query 47405 GGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGTTGATGCTATAGTT 47464 || || ||||| ||| | | ||| || ||||||| | | ||| ||| || || Sbjct 75825 GGTCATCAACAAGCACGTCGTGTTTGGAAAGATTATTTCCCAGATGTTAATGGAATTGTA 75766 Query 47465 TATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAATCGAATTCGATGCG 47524 | | | || || ||| ||| ||| | ||| ||||| ||||| ||||| Sbjct 75765 TTTTTAGTTGATACTGCTGATCCACAAAGATTTGAAGAATCAAAAGCTGAATTAGATGCT 75706 Query 47525 TTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGGCAATAAAATCGAC 47584 | ||| |||| ||| | | ||||| ||||| | ||||| |||||||| || Sbjct 75705 CTTTTAGCTATTGAAGATTTAGAAAAAGTTCCATTTTTAATCTTGGGTAATAAAATTGAT 75646 Query 47585 AAACAAAACGC 47595 |||||| || Sbjct 75645 TCACAAAAAGC 75635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454236785820