Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq277 237 2e-57 seq280 100 4e-16 seq360 87.8 2e-12 >seq277 Length=184736 Score = 237 bits (262), Expect = 2e-57 Identities = 951/1474 (65%), Gaps = 49/1474 (3%) Strand=Plus/Minus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 || ||||||| || |||||||| || |||||||| | ||| |||||||||| || || Sbjct 160381 TAAATGTTTGAAGTATATGGTTCGAAACATTCATTGTAACCTAAGATTTGTGAAGTTGAA 160322 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTC--CTTGATGCGTT 110825 || ||||||||||| || | || | | || | || ||| | | | || | | Sbjct 160321 GCAGTTGGCATTGGAGCAACTAATAAAGAATTTCTAACACCATATTTAACAACATCAGCT 160262 Query 110826 CCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || | | ||||||| | | || || ||||||| | |||| | ||||| || Sbjct 160261 --TTCAAATCATCCCAATTCCATAAACCAG-TTGGTTTTTGAT-CCCATAAATCAAATTG 160206 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 | | ||||| || || |||||||| | || |||||||| | ||||| || ||| Sbjct 160205 TAATAAACCTTGAGAAGCTGGAGAACCTTGGAAAGTTTCATAAGCACCTTCTTTTTTAGC 160146 Query 110944 CAATTCA-CAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 |||||| ||| || || | | || ||||| ||||||||||| || || || | Sbjct 160145 TAATTCAACAGAA-GCTTCAACAGCAGCATGATAAATGGTTTCAAAAATTTGAATGTTTA 160087 Query 111003 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 111062 || || |||| | ||| ||||||| | || | || || |||| || | || Sbjct 160086 ATTCTTTAGCTTTTTGTGATTCAAATGGTAAACGTAAAGCCATGAAAGCATCAGCTAAAC 160027 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGG 111122 |||| ||||| ||| |||| ||||| | || ||| || || ||| || ||||| | Sbjct 160026 CTTGGACACCTAAAGCAATTGGTCTATTTCTCATGTTGGATCTTCTTGCTTCTTCAACTG 159967 Query 111123 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 111182 |||| || || | ||||| | || ||||| ||| |||||||||| || | |||| || Sbjct 159966 GATAGAAGTTACGATCAATAATTCTGTTTAAATTCTTGGTAACAACTTTAGCAATTTTAT 159907 Query 111183 GAAGTTTTTCATAATCAAA------AG---TGCGAGTCT-------CTTCATTGACATAC 111226 | | || |||| | | | | || |||| |||| ||||| ||| | Sbjct 159906 GTAATTGTTCAAAGTTATAGAATTGAGTTTTGCG-GTCTGCTGAAACTTCAATGA---AG 159851 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | ||| ||||| || || || |||||||| ||||| || ||| || Sbjct 159850 GCTGGTAAGGCAATTGAAGCTAAGTTACAAACAGCAACTTCATCTGGTGATGAGTATTCA 159791 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | |||||| ||||||||||| || || || | ||||| |||||||| ||| | ||| Sbjct 159790 ACAATTTCAGTACATAAGTTTGATGATTTGATGATACCCAAGTTCTTTTGATTAGTTTTC 159731 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 ||||| || ||||| ||||| |||||||| || || || || || || || | || | Sbjct 159730 TTGTTACAAGCATCTTTGTAAAGCATGTATGGAGTACCAGTTTCAGTTTGAGCTTCCAAG 159671 Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 ||||| | ||| | | ||| ||| | | | || || || || || Sbjct 159670 ATAGCATACCATAATTTTTGAGCTTTAACAGTCTTTCTACCACGACCTTCTTTTTCATAA 159611 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 111526 | || | ||||||| || ||||| | || | |||||| || | | | Sbjct 159610 CGTTCATATAATTCTTCAAATTCATCACCATAAGTTTCATCTAAACCTGGAGCTTCATTT 159551 Query 111527 GGACAGAAAAGAGACCATTGACCA--CCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 111584 ||| |||| | | ||||| |||| ||| ||||| | |||||||| | |||| | Sbjct 159550 GGAGAGAATAATGTCCATTCACCATTGCTT--TCAACTCTTTTCATGAATAAATCTGAGA 159493 Query 111585 TCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 111643 |||| | | | || | ||| | | | | || ||||| | ||| || || || Sbjct 159492 TCCATAAAGCAGGGAATAAATCACGAGCTCTGA-TTTCTTCTTTACCATGATTCTTTCTG 159434 Query 111644 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC- 111702 | || | ||| || | ||||||||||||||||| || | || | || | || || Sbjct 159433 ATATCGATGAAATCAAAAATATCCGCGTGCCATGGTTCTAAGTATAAAGCAAAAGCACCT 159374 Query 111703 ---CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 |||| | ||| |||||| ||||| || || ||| ||| || || | || ||| Sbjct 159373 GGTCTTTTG-TTACCACCTTGATCAACATAACGAGCAGTGTTGTTGAAGACTCTAACCAT 159315 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 |||||| ||||||| ||| |||||| || || ||| ||| | | | ||| | Sbjct 159314 TGGAATGATACCATTTGAAGTACCATTAGTACCAGCAATGTAAGAACCAGTAGATCTAAT 159255 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 | ||| || || | |||||||| ||||| ||| || ||| ||||| | | | Sbjct 159254 GTTATGAATATGTAAACCAATACCACCAGCAGTCTTAGAAATTAAGGCACATTGTTTTAA 159195 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 |||| |||| ||||| | || || || || | | || | | ||| || ||||| Sbjct 159194 AGTTTCATAAATACCATCAATAGAATCATCTTGCATAGCAACTAAGAAACATGAAGACAT 159135 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTT 111998 || || ||| |||||||| || || | ||||| | || || |||| ||| | || Sbjct 159134 TTGAGGATGTGGAGTACCAGCGTTAAATAAAGTTGGAGAAGCATGTGTGAA-ATATCTTT 159076 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 |||||| || || || || | ||| ||||| ||| || ||||| || || | Sbjct 159075 CAGACATCAAGTTATAAGTTTCAACAACACTTTCAATATCTCTACCATGGATACCAATAG 159016 Query 112059 CGACCCGCATGA--ACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAG 112116 | || | ||||| | |||| || || |||| || | ||||| | | | ||| Sbjct 159015 CAACTCTCATGATTAAATGT--TGAGGTCTTTCAGCGACTTTACCATCAACTCTTAAAAG 158958 Query 112117 ATA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 ||| | |||| || | ||||||| |||||| || Sbjct 158957 ATATGATCTT-TCTAAAGTTTTGAAACCAAAATA 158925 >seq280 Length=108631 Score = 100 bits (110), Expect = 4e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663 |||||||||||||| || || || ||||| ||||| || ||||||||| | ||||| Sbjct 25062 TATGGTCGTGTTGCTCCTCGTTCTGGTCTTGCTGTTAAACATGGTATTTCAACAGGTGCA 25003 Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCA 164716 |||||||||||| | || |||| ||||||||| ||| | || || || ||||| Sbjct 25002 GGTGTTATTGATGCAGATTATAGAGGTGAAGTTAAAATTGTACTTTTTAATCA 24950 >seq360 Length=110357 Score = 87.8 bits (96), Expect = 2e-12 Identities = 214/321 (67%), Gaps = 5/321 (2%) Strand=Plus/Plus Query 11537 TCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCT 11596 ||||| |||||||| || | ||||||||| | || |||||| |||||||| | Sbjct 19953 TCAAACCCATCCATTTCAACTAATAATTGATTTAAAGTAGCTTCTCTTTCATCATTACCA 20012 Query 11597 GGCATACCACCAGC---ACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACA 11653 ||||| |||| | || | || || || | |||||||| ||||||| || | | Sbjct 20013 CCCATACTACCACCTTTACCTCTTTCTTTACCAATTGCATCAATTTCATCAACAAAAATA 20072 Query 11654 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACA 11713 || |||| ||| || || ||| ||| | ||| ||||| ||| ||||| ||| Sbjct 20073 ATTGCTGGTGCCATTTTACGTGCATTTTTAAATAAATCACGAACTCTTGAAGCACCAACA 20132 Query 11714 CCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTC 11772 ||||||||||| || ||||| | || | || |||| | ||||| ||| | ||| Sbjct 20133 CCAACAAACATTTCAACAAATTCTGAACCTGA-AACTGATAAAAATGGAACACCAGCTTC 20191 Query 11773 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGC 11832 ||| || | ||| || | || || || || |||||||| ||| | | || || Sbjct 20192 ACCTGCTGTAGCTTTTGCTAAAAGTGTTTTACCTGTACCTGGAGGACCTGATAAAATTGC 20251 Query 11833 GCCTCGGGGGATCTTGGCACC 11853 |||| || || || ||||| Sbjct 20252 ACCTCTTGGAATTTTTGCACC 20272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029142454400