Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09-
21] 364 sequences; 15,901,152 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq277 237 2e-57
seq280 100 4e-16
seq360 87.8 2e-12
>seq277
Length=184736
Score = 237 bits (262), Expect = 2e-57
Identities = 951/1474 (65%), Gaps = 49/1474 (3%)
Strand=Plus/Minus
Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767
|| ||||||| || |||||||| || |||||||| | ||| |||||||||| || ||
Sbjct 160381 TAAATGTTTGAAGTATATGGTTCGAAACATTCATTGTAACCTAAGATTTGTGAAGTTGAA 160322
Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTC--CTTGATGCGTT 110825
|| ||||||||||| || | || | | || | || ||| | | | || | |
Sbjct 160321 GCAGTTGGCATTGGAGCAACTAATAAAGAATTTCTAACACCATATTTAACAACATCAGCT 160262
Query 110826 CCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
|| | | ||||||| | | || || ||||||| | |||| | ||||| ||
Sbjct 160261 --TTCAAATCATCCCAATTCCATAAACCAG-TTGGTTTTTGAT-CCCATAAATCAAATTG 160206
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
| | ||||| || || |||||||| | || |||||||| | ||||| || |||
Sbjct 160205 TAATAAACCTTGAGAAGCTGGAGAACCTTGGAAAGTTTCATAAGCACCTTCTTTTTTAGC 160146
Query 110944 CAATTCA-CAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002
|||||| ||| || || | | || ||||| ||||||||||| || || || |
Sbjct 160145 TAATTCAACAGAA-GCTTCAACAGCAGCATGATAAATGGTTTCAAAAATTTGAATGTTTA 160087
Query 111003 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 111062
|| || |||| | ||| ||||||| | || | || || |||| || | ||
Sbjct 160086 ATTCTTTAGCTTTTTGTGATTCAAATGGTAAACGTAAAGCCATGAAAGCATCAGCTAAAC 160027
Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGG 111122
|||| ||||| ||| |||| ||||| | || ||| || || ||| || ||||| |
Sbjct 160026 CTTGGACACCTAAAGCAATTGGTCTATTTCTCATGTTGGATCTTCTTGCTTCTTCAACTG 159967
Query 111123 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 111182
|||| || || | ||||| | || ||||| ||| |||||||||| || | |||| ||
Sbjct 159966 GATAGAAGTTACGATCAATAATTCTGTTTAAATTCTTGGTAACAACTTTAGCAATTTTAT 159907
Query 111183 GAAGTTTTTCATAATCAAA------AG---TGCGAGTCT-------CTTCATTGACATAC 111226
| | || |||| | | | | || |||| |||| ||||| ||| |
Sbjct 159906 GTAATTGTTCAAAGTTATAGAATTGAGTTTTGCG-GTCTGCTGAAACTTCAATGA---AG 159851
Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286
||| | ||| ||||| || || || |||||||| ||||| || ||| ||
Sbjct 159850 GCTGGTAAGGCAATTGAAGCTAAGTTACAAACAGCAACTTCATCTGGTGATGAGTATTCA 159791
Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346
| |||||| ||||||||||| || || || | ||||| |||||||| ||| | |||
Sbjct 159790 ACAATTTCAGTACATAAGTTTGATGATTTGATGATACCCAAGTTCTTTTGATTAGTTTTC 159731
Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406
||||| || ||||| ||||| |||||||| || || || || || || || | || |
Sbjct 159730 TTGTTACAAGCATCTTTGTAAAGCATGTATGGAGTACCAGTTTCAGTTTGAGCTTCCAAG 159671
Query 111407 ATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466
||||| | ||| | | ||| ||| | | | || || || || ||
Sbjct 159670 ATAGCATACCATAATTTTTGAGCTTTAACAGTCTTTCTACCACGACCTTCTTTTTCATAA 159611
Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 111526
| || | ||||||| || ||||| | || | |||||| || | | |
Sbjct 159610 CGTTCATATAATTCTTCAAATTCATCACCATAAGTTTCATCTAAACCTGGAGCTTCATTT 159551
Query 111527 GGACAGAAAAGAGACCATTGACCA--CCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 111584
||| |||| | | ||||| |||| ||| ||||| | |||||||| | |||| |
Sbjct 159550 GGAGAGAATAATGTCCATTCACCATTGCTT--TCAACTCTTTTCATGAATAAATCTGAGA 159493
Query 111585 TCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 111643
|||| | | | || | ||| | | | | || ||||| | ||| || || ||
Sbjct 159492 TCCATAAAGCAGGGAATAAATCACGAGCTCTGA-TTTCTTCTTTACCATGATTCTTTCTG 159434
Query 111644 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC- 111702
| || | ||| || | ||||||||||||||||| || | || | || | || ||
Sbjct 159433 ATATCGATGAAATCAAAAATATCCGCGTGCCATGGTTCTAAGTATAAAGCAAAAGCACCT 159374
Query 111703 ---CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759
|||| | ||| |||||| ||||| || || ||| ||| || || | || |||
Sbjct 159373 GGTCTTTTG-TTACCACCTTGATCAACATAACGAGCAGTGTTGTTGAAGACTCTAACCAT 159315
Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819
|||||| ||||||| ||| |||||| || || ||| ||| | | | ||| |
Sbjct 159314 TGGAATGATACCATTTGAAGTACCATTAGTACCAGCAATGTAAGAACCAGTAGATCTAAT 159255
Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879
| ||| || || | |||||||| ||||| ||| || ||| ||||| | | |
Sbjct 159254 GTTATGAATATGTAAACCAATACCACCAGCAGTCTTAGAAATTAAGGCACATTGTTTTAA 159195
Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939
|||| |||| ||||| | || || || || | | || | | ||| || |||||
Sbjct 159194 AGTTTCATAAATACCATCAATAGAATCATCTTGCATAGCAACTAAGAAACATGAAGACAT 159135
Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTT 111998
|| || ||| |||||||| || || | ||||| | || || |||| ||| | ||
Sbjct 159134 TTGAGGATGTGGAGTACCAGCGTTAAATAAAGTTGGAGAAGCATGTGTGAA-ATATCTTT 159076
Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058
|||||| || || || || | ||| ||||| ||| || ||||| || || |
Sbjct 159075 CAGACATCAAGTTATAAGTTTCAACAACACTTTCAATATCTCTACCATGGATACCAATAG 159016
Query 112059 CGACCCGCATGA--ACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAG 112116
| || | ||||| | |||| || || |||| || | ||||| | | | |||
Sbjct 159015 CAACTCTCATGATTAAATGT--TGAGGTCTTTCAGCGACTTTACCATCAACTCTTAAAAG 158958
Query 112117 ATA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
||| | |||| || | ||||||| |||||| ||
Sbjct 158957 ATATGATCTT-TCTAAAGTTTTGAAACCAAAATA 158925
>seq280
Length=108631
Score = 100 bits (110), Expect = 4e-16
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
|||||||||||||| || || || ||||| ||||| || ||||||||| | |||||
Sbjct 25062 TATGGTCGTGTTGCTCCTCGTTCTGGTCTTGCTGTTAAACATGGTATTTCAACAGGTGCA 25003
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCA 164716
|||||||||||| | || |||| ||||||||| ||| | || || || |||||
Sbjct 25002 GGTGTTATTGATGCAGATTATAGAGGTGAAGTTAAAATTGTACTTTTTAATCA 24950
>seq360
Length=110357
Score = 87.8 bits (96), Expect = 2e-12
Identities = 214/321 (67%), Gaps = 5/321 (2%)
Strand=Plus/Plus
Query 11537 TCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCT 11596
||||| |||||||| || | ||||||||| | || |||||| |||||||| |
Sbjct 19953 TCAAACCCATCCATTTCAACTAATAATTGATTTAAAGTAGCTTCTCTTTCATCATTACCA 20012
Query 11597 GGCATACCACCAGC---ACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACA 11653
||||| |||| | || | || || || | |||||||| ||||||| || | |
Sbjct 20013 CCCATACTACCACCTTTACCTCTTTCTTTACCAATTGCATCAATTTCATCAACAAAAATA 20072
Query 11654 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACA 11713
|| |||| ||| || || ||| ||| | ||| ||||| ||| ||||| |||
Sbjct 20073 ATTGCTGGTGCCATTTTACGTGCATTTTTAAATAAATCACGAACTCTTGAAGCACCAACA 20132
Query 11714 CCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTC 11772
||||||||||| || ||||| | || | || |||| | ||||| ||| | |||
Sbjct 20133 CCAACAAACATTTCAACAAATTCTGAACCTGA-AACTGATAAAAATGGAACACCAGCTTC 20191
Query 11773 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGC 11832
||| || | ||| || | || || || || |||||||| ||| | | || ||
Sbjct 20192 ACCTGCTGTAGCTTTTGCTAAAAGTGTTTTACCTGTACCTGGAGGACCTGATAAAATTGC 20251
Query 11833 GCCTCGGGGGATCTTGGCACC 11853
|||| || || || |||||
Sbjct 20252 ACCTCTTGGAATTTTTGCACC 20272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029142454400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |