Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq291 107 2e-18 >seq291 Length=72889 Score = 107 bits (118), Expect = 2e-18 Identities = 357/549 (65%), Gaps = 26/549 (5%) Strand=Plus/Minus Query 111589 GGATGAGGTCTATAATTCTCCAATTCAAAGTCATCAGCAACAAAATCGTCAATGCAAGCA 111648 ||||| | | |||||| | | |||||| || ||| | |||||| ||||| | Sbjct 11205 GGATGTGATTTATAATCAACAATTTCAAAATCTTCATAAGTAAAATCATCAATATCTTTA 11146 Query 111649 ACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGT 111708 | || |||||| ||| |||||| || ||| | || |||| ||| || | Sbjct 11145 ATATCTCTTTTAATAATTAATTTTGGGAATTCATAAGGTTCTCTTGTAATTTGTTCTTTT 11086 Query 111709 AAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAA 111768 |||| | | |||| | ||||||||| | ||| || ||| ||| || ||||| | | Sbjct 11085 AAAGCATCAACATGATCTTTATAAACATGAGAATCACCCATAGTATGTATAAATTCACCA 11026 Query 111769 GGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTA 111828 |||| | || | | ||||||||| | || | || | ||| |||||| ||| Sbjct 11025 CAATCCATATCAACAACTTTTGCAATCATTTTAGTTAATAAAGCATAAGAAGCAATATTA 10966 Query 111829 AATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATA------GT 111882 || || || || || |||||||| | ||||||||||||| |||||||| || Sbjct 10965 AAAGGAACTCCAAGACCCATATCGCAAGATCTTTGATATAATAAACATGATAATTGTGGT 10906 Query 111883 TTA----TTTTGTGA-----CACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCC 111933 ||| ||| || ||||||||||| ||| |||||||| || || |||||| Sbjct 10905 TTACCTTCTTTAGGAAAATTAACATAAAATTGTGAAAAAACATGACATGGTGGTAATGCC 10846 Query 111934 ATCCCATTCATAAA-----GGGTCCCCATGCACACATGATCATCCTTCTGCTGTAGCGA- 111987 || ||| ||| || ||||||| |||| || || | | || || Sbjct 10845 AT--AATTGGGAAATCTGGTGGATTCCATGCAGACATTATAATACGACGATCATAAGGAT 10788 Query 111988 TTATGTTCAATGTCGTGTATGACATTCA-AGAGCTGGTCTATCCCTTTACCAGTATAATC 112046 || | |||||| | || || || |||| | || || | |||| ||| | |||||| Sbjct 10787 TTGTTTTCAAT-TTATGAATAAC-TTCAGCTAATTGATCAACACCTTGACCTGAATAATC 10730 Query 112047 CGCCTGACATCCAGTGTATGTTGCCCCATAGTGTCTCCATTGGAATCCATAAATAGGCCC 112106 || | ||| |||| ||| | || || | |||||||||||||||||||||| || || Sbjct 10729 AGCATCACAATCAGTATATTTAGCACCGAAATGTCTCCATTGGAATCCATAAACTGGACC 10670 Query 112107 CAGATCTCC 112115 | ||| || Sbjct 10669 TAAATCACC 10661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391943861231332