Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq182 154 7e-33 >seq182 Length=54856 Score = 154 bits (170), Expect = 7e-33 Identities = 335/499 (67%), Gaps = 7/499 (1%) Strand=Plus/Plus Query 64883 GTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGT 64942 ||||| | || || ||||| |||| | ||||| | || | ||| || ||||||||| Sbjct 36396 GTACTCCAACCAGTACCAATCCCCTCAGCACCATTAACTAGCACCATTGGGATAATTGGT 36455 Query 64943 GCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAAATGGCATCA 65002 ||| | |||| |||||| | ||||||||| | ||| | | | |||||| Sbjct 36456 AAATACCATGTAGGTTCAACATTTTCACCATCATCTTGTTCATAAGTATACAGAGCATCA 36515 Query 65003 TCCTCTT--TTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATCTTT 65060 || || ||| |||| | | |||||| || |||| ||||||||||||||| Sbjct 36516 TCAGTTTGATTGAAAATTTTT--CTTGTTATTGTAGCTAATTCAGTATAAATATATCTCG 36573 Query 65061 CGGATGCGTGGTCTTGTCCAG---TTCGTCGTGTTCCAAACTGACCATTTGGCATTAATA 65117 | | || |||| ||| | || ||| || || ||| ||||| | ||||| Sbjct 36574 CAGCTGATGCATCTTTACCACCCATATTTCTTGTACCGAAAGAACCTTTTGGTAATAATA 36633 Query 65118 AATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATTTAAAC 65177 |||||||||| |||||||||| |||| || || | || | ||||| | ||||| Sbjct 36634 AATTAATATTATTTGAACCAACGAAATCTTGTGCTAACCCAACAATTGTAGTGATTAAAG 36693 Query 65178 TCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTT 65237 |||||| |||||||| |||| |||||| || | ||| ||| ||||||||||||| Sbjct 36694 ATTGTTCACCATGATGATAACCTGTATGTTCTGAAATATAACCAGCTAATTGAGCAACTT 36753 Query 65238 TTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAATACAATATTTTCCGTAAACTAATTT 65297 | ||||| | | ||||||| ||| || | | |||||| ||||| | | || || Sbjct 36754 TAATTTCAGATTTTAAATTACGTTTGAAAGAACCATACAAGATTTTTCTTTGACCTGGTT 36813 Query 65298 TCAATCCATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGA 65357 | || ||||||| || | ||||| ||| | |||| |||| || || | Sbjct 36814 TAAACCCATCCAATACAGATGGAATTGATCTAATATTATCAGCCATTGAAAATAAAATTA 36873 Query 65358 ATTCTTTGTTAATAAATTC 65376 |||| || ||||||||||| Sbjct 36874 ATTCCTTATTAATAAATTC 36892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235678954464600