Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq326 118 1e-21 seq292 113 5e-20 seq275 102 9e-17 >seq326 Length=266662 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| | || || || ||||| ||| | || ||||| || Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || | ||||| || || || || || ||||| || ||||| Sbjct 239498 GATACTATTGACAATGTTAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACCAA 239439 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| ||||||| |||||||| ||| | || |||| | | ||| || | || || ||| Sbjct 239438 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACAAT 239379 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 | ||||| ||||| || | ||| | ||| Sbjct 239378 ATTCAAAAAGAATCAACATTGCATTTGGTC 239349 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || | || || || ||||| ||| | || ||||| || Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || | |||||||| |||||||| || ||||| || || || Sbjct 240182 GACACTATTGACAATGTTAAATCAAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 240123 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | |||||||||||||| ||| | || || | | | ||| || | || || ||| Sbjct 240122 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAAT 240063 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||| ||||| || | ||| | |||||| Sbjct 240062 ATCCAAAAAGAATCAACATTACATTTGGTCTTG 240030 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 27452 AGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAA 27511 ||||||| || ||| | |||| || | || | || ||||| || || || || | Sbjct 240424 AGGTTGAATCTTCTGACACTATTGATAACGTCAAATCCAAGATTCAAGATAAAGAAGGGA 240365 Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571 | || ||||| || || ||| | |||||||||||||| ||| | || |||| |||||| Sbjct 240364 TCCCACCAGATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTT 240305 Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 || ||||||| || | ||||| ||||| || | ||| | ||||| Sbjct 240304 TATCAGACTACAACATTCAAAAAGAATCAACATTACATTTGGTCTT 240259 >seq292 Length=16354 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || || || ||||| | || ||||| || | Sbjct 6620 ATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATCTTCT 6561 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || | |||||||| || || || || ||||| || || || Sbjct 6560 GATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTGATCAA 6501 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||| ||||||||||| ||| | || |||| | | || || | || ||||| Sbjct 6500 CAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTATAAC 6441 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | ||||| ||||| || | ||| ||||||| Sbjct 6440 ATTCAAAAAGAATCAACATTACATTTAGTCTT 6409 >seq275 Length=119121 Score = 102 bits (112), Expect = 9e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || ||||| ||||| | || ||||| || ||||| ||||| ||| | || | Sbjct 71341 ACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCATTGACAATGTCAAATCA 71282 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 |||||||| ||||| || || ||||| || || || || ||| |||| ||||||||||| Sbjct 71281 AAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGTTTAATCTTTGCTGGTAAA 71222 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||| | || |||| | | || || | || || || | ||||| ||||| ||| | ||| Sbjct 71221 CAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAAAAAGAATCAACTTTACAT 71162 Query 27610 CTAGTCTTG 27618 | || ||| Sbjct 71161 TTGGTTTTG 71153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307805087680