Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq292 114 8e-21 seq326 107 1e-18 seq275 102 5e-17 >seq292 Length=16354 Score = 114 bits (126), Expect = 8e-21 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || ||||||||||||||||| || | |||| | ||||| | ||||||||| ||||| Sbjct 6430 TCTTTTTGAATGTTATAATCAGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAG 6489 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 |||||||| ||||| || || || | || || || ||| ||| ||||| ||| || | Sbjct 6490 ATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTATCT-TGAATTTTTGATTTGACATT 6548 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 ||| || || || ||||| | ||| || |||||||| ||||| ||||| || Sbjct 6549 GTCAATAGTATCAGAAGATTCAACTTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAAC 6608 Query 34695 AAAAATCTGCATGTTGA 34711 |||||| ||||| |||| Sbjct 6609 AAAAATTTGCATCTTGA 6625 >seq326 Length=266662 Score = 107 bits (118), Expect = 1e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || |||||||| | || || ||||||||||| || ||||| | |||| ||||| Sbjct 239575 AAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTTCTACCGTCT 239634 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||||||||| || || |||||||| ||||| || || || | || || || ||| Sbjct 239635 TCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCT 239694 Query 34615 GTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 ||| ||||| ||| ||| || ||| || || || ||||| | || || || Sbjct 239695 TGGAT-TTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACTTCTAAAGTAATAGT 239753 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| ||||| ||||| || ||||| ||||| Sbjct 239754 TTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || |||||||| | || || ||||||||||| || ||||| | || || | ||| Sbjct 239803 AAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCT 239862 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||||||||| || || || ||||| ||||| || || || | || || |||||| Sbjct 239863 TCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCTTTGTCT 239922 Query 34615 GTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 ||| ||| | ||||||| || || |||||| || ||||| | || || || Sbjct 239923 -TGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAACTTCTAAAGTAATGGT 239981 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || ||||| || ||||| ||||| Sbjct 239982 CTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 >seq275 Length=119121 Score = 102 bits (112), Expect = 5e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| |||||||| | ||| || ||||||||||| ||||| || Sbjct 71139 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGAT 71198 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||||||||| ||||| |||||||| ||||| || || || Sbjct 71199 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 71258 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| ||| ||||| ||| || | ||| || || || || Sbjct 71259 ATACCTTCTTTGTCT-TGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAAC 71317 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAA 34698 ||| | ||| || || ||||| ||||| ||||| || ||| Sbjct 71318 TTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAAA 71357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728203780812