Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq326 111 1e-19 seq275 98.7 7e-16 seq292 93.3 3e-14 >seq326 Length=266662 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || |||||| | ||||| ||| ||| || | || || ||| | Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183 Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| | | ||||| || ||| |||||| ||||| |||||| |||| || | Sbjct 240182 GACACTATTGACAAT--GTTAAATCAAAAATTCAAGACAAGGAAGGTATTCCACCTGATC 240125 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| || |||||||| || |||||||| || |||| | | ||| || ||||||| Sbjct 240124 AACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACA 240065 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | ||||||||||| || || |||||||| ||| | ||| | || || Sbjct 240064 ATATCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGG 240016 Score = 102 bits (112), Expect = 6e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || ||||| | || || ||| |||||| | || || ||| || Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | || |||||| |||||| || ||||||||| |||| || | Sbjct 239726 GATACTATTGATAAC--GTCAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATC 239669 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| |||||||| || || |||||||| || |||| | | ||| || || |||| Sbjct 239668 AACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACA 239609 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 |||| |||||||| || || ||||||||||| Sbjct 239608 ACATTCAAAAAGAATCAACATTACATTTGGTTTT 239575 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||| || ||| | ||||| ||| ||| || | || || ||| | Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || ||||| || ||| |||||| || ||||||||| |||| || | Sbjct 239498 GATACTATTGACAAT--GTTAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACC 239441 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| |||||||| || || |||||||| || || | | | ||| || ||||||| Sbjct 239440 AACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACA 239381 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 | || |||||||| || ||||||||||| Sbjct 239380 ATATTCAAAAAGAATCAACATTGCATTTGGT 239350 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGCA 27847 ||||||||||| || |||||| | ||||| || ||||| | || || ||| | || Sbjct 240014 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA 239955 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || | || || ||| ||||| |||||||||||| |||| || | Sbjct 239954 GACACCATCGATAAC--GTTAAATCCAAAATTCAAGACAAAGAAGGTATTCCACCTGATC 239897 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| || ||||| || || |||||||| || || | || | || || || |||| Sbjct 239896 AACAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACA 239837 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 |||| |||||||| || || |||||||| || Sbjct 239836 ACATTCAAAAAGAATCAACATTACATTTGGTCTT 239803 >seq275 Length=119121 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 27798 TTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACCGA--CGAT 27855 ||| || |||||| | ||||| || ||||| | || || ||| | || | || Sbjct 71357 TTTCGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCAT 71298 Query 27856 GTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGG 27915 ||||| |||||| |||||| |||||||||||| |||| || || ||||| Sbjct 71297 TGACAAT--GTCAAATCAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGT 71240 Query 27916 TTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAA 27975 ||||| ||||| || |||||||| || || | | | || || ||||||||||| ||| Sbjct 71239 TTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAA 71180 Query 27976 AAAGAGAGCACTTTGCATTTGGTTTTG 28002 ||||| ||||| |||||||||||| Sbjct 71179 AAAGAATCAACTTTACATTTGGTTTTG 71153 >seq292 Length=16354 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 || |||||||||||||| |||||| | || || ||| ||||| | || || ||| Sbjct 6623 AAGATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATCT 6564 Query 27847 ACCG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 | | || || ||||| |||||| |||||| || ||||||||| |||| | Sbjct 6563 TCTGATACTATTGACAAT--GTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTG 6506 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||||| ||||| ||||| || |||||||| || || | | | || || |||| Sbjct 6505 ATCAACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATT 6446 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 | ||||| |||||||| || || ||||| || || Sbjct 6445 ATAACATTCAAAAAGAATCAACATTACATTTAGTCTT 6409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355860821305428