Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq326 120 7e-22 seq292 107 4e-18 >seq326 Length=266662 Score = 120 bits (132), Expect = 7e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| ||||| | || | || || |||||||| || || ||||| | | ||| || || Sbjct 239343 TCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGATAAGGTTCTACC 239402 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | || || || ||||| || | |||||||||||||| |||| ||||| || Sbjct 239403 ATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGAATACCTTCTTT 239462 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || ||||| ||| ||| || || || || || || || |||||| || | |||||| Sbjct 239463 ATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAACTTCTAAAGTGAT 239522 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | |||||| ||||| | ||||| Sbjct 239523 AGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 111 bits (122), Expect = 4e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||| | || | || || |||||||| ||||| || || | | || | || Sbjct 239799 TCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACC 239858 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | || || || ||||| || | |||||||| ||||| |||| ||||| || Sbjct 239859 ATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCTTT 239918 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || || || ||| ||||| ||||||||||| || |||||| || | ||| || Sbjct 239919 GTCTTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAACTTCTAAAGTAAT 239978 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | ||| || || || | ||||| Sbjct 239979 GGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || ||||||||||| || ||||| | | ||| || || ||||| | || || || Sbjct 240046 GTTGATTCTTTTTGGATATTGTAATCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCA 240105 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || | |||||||| ||||| |||| ||||||||||| || || ||| ||| Sbjct 240106 GCAAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTTTGATTTA 240165 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || || || ||||| || |||||| || | |||||| || || || || | ||| Sbjct 240166 ACATTGTCAATAGTGTCTGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGTCAAAGTT 240225 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 240226 TTGACGAAAATTTGCAT 240242 >seq292 Length=16354 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||| | || | || || |||||||| ||||||||||| | | || || || Sbjct 6405 TCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTACC 6464 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | || || || || ||||| | |||||||| ||||| |||| ||||| || Sbjct 6465 ATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTT 6524 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || || ||| ||| || || || || || ||||| |||||| || | || || Sbjct 6525 ATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAACTTCTAAGGTAAT 6584 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || | ||| || ||||| | ||||| || Sbjct 6585 GGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCATCTT 6623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146594004860