Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq326 159 8e-34 seq275 145 2e-29 seq292 127 5e-24 seq222 109 1e-18 seq54 87.8 4e-12 >seq326 Length=266662 Score = 159 bits (176), Expect = 8e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | || | || ||||||||||||| ||||||||| | || ||||| || Sbjct 240027 TCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGATAAGGTTCTACC 240086 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||||| || || ||||| || || | |||||||| || || |||||||||||||| Sbjct 240087 GTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCCTT 240146 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| || ||| || ||| || || |||||||| | ||| || ||||| ||||| Sbjct 240147 GTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAACTTCTAAAGTGAT 240206 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||||||||| | ||| | |||||| Sbjct 240207 AGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | || | || ||||||||||| | ||||||||| | || ||||| || Sbjct 239343 TCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGATAAGGTTCTACC 239402 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| || || |||||||| || | ||||||||||| || ||||||||||| || Sbjct 239403 ATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGAATACCTTCTTT 239462 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||| ||| || ||| || || || ||||| | ||| || ||||| ||||| Sbjct 239463 ATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAACTTCTAAAGTGAT 239522 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || |||||||| || | || | |||||| Sbjct 239523 AGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 147 bits (162), Expect = 5e-30 Identities = 153/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||||||||| | ||||| || | ||||| | |||||||||| || || ||| Sbjct 239818 GTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCTTCTAATTGTTTACCA 239877 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 ||||| || | |||||||| || || ||||||||||| |||||||| || ||| | || Sbjct 239878 GCGAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGAAT-TTTGGATTT 239936 Query 225637 ACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 | | | |||||||||||||| | ||| || ||||| || || ||||| || |||||||| Sbjct 239937 AACGTTATCGATGGTGTCTGATGATTCAACTTCTAAAGTAATGGTCTTACCAGTCAAAGT 239996 Query 225696 TTTTATGAACACTTGCAT 225713 ||| | ||| | |||||| Sbjct 239997 TTTAACGAAAATTTGCAT 240014 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||||||||| | ||||| || | || ||||| || ||||||| || || ||| Sbjct 239590 GTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTTCTACCGTCTTCTAATTGTTTACCA 239649 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 ||||| || | |||||||| || || ||||||||||| || |||||||| ||| || Sbjct 239650 GCGAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTTGATTTG 239709 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || || || || || || | ||| || ||||| || || || || || || || ||| Sbjct 239710 ACGTTATCAATAGTATCGGAAGATTCAACTTCTAAAGTAATAGTTTTACCTGTTAAGGTT 239769 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | |||||| Sbjct 239770 TTAACGAAAATTTGCAT 239786 >seq275 Length=119121 Score = 145 bits (160), Expect = 2e-29 Identities = 166/222 (75%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | || | ||| ||||||||||| | |||||||| | |||||||| || Sbjct 71150 TCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGATAAAGTTCTACC 71209 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| || || ||||| ||||| | |||||||| || || ||||||||||| || Sbjct 71210 ATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTT 71269 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| || ||| || ||| || ||||| || || | ||| || ||||| || || Sbjct 71270 GTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAACTTCTAAGGTAAT 71329 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATG 225719 ||||| || || |||||||| | ||| ||| ||| |||| Sbjct 71330 GGTCTTACCAGTTAAAGTTTTAACGAA-ACTATAATTATATG 71370 >seq292 Length=16354 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||||||||| | || ||||| | |||||||| |||||||||| || || ||| Sbjct 6424 GTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTACCATCTTCTAATTGTTTACCA 6483 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 || ||||| | |||||||| || || ||||||||||| || ||||| || ||| || Sbjct 6484 GCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTTGATTTG 6543 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| || || || || || | ||| || ||||| || || || || || || |||||| Sbjct 6544 ACATTGTCAATAGTATCAGAAGATTCAACTTCTAAGGTAATGGTTTTACCTGTTAAAGTT 6603 Query 225697 TTTATGAACACTTGCATTTT 225716 || | || | |||||| || Sbjct 6604 TTAACAAAAATTTGCATCTT 6623 >seq222 Length=62361 Score = 109 bits (120), Expect = 1e-18 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||||||||| || ||||| || || || |||||||| ||||||||||| Sbjct 22787 GAAAATTTGACCATCAGTAATGGAAATAACGTTAGTTGGAATATAAGCTGAAACATCACC 22846 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAA 4577 |||| ||||| | ||| ||||| || |||| ||| |||||||| || Sbjct 22847 ACCTTGGGTTTCAATAACTGGTAAAGCAGTTAATGAACCACCACCTAA 22894 >seq54 Length=1042 Score = 87.8 bits (96), Expect = 4e-12 Identities = 186/275 (68%), Gaps = 2/275 (1%) Strand=Plus/Minus Query 7445 TATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAA 7504 |||| || ||||||| ||||||||||| ||||| ||| | || | || |||| Sbjct 957 TATACTTTATATTTGCCATATTTTCTGGTATAATAGGGTCTACTATGTCATTAATAATAA 898 Query 7505 GGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACG 7564 || |||||||||| | | ||| |||| |||| |||||| ||| | | ||| | Sbjct 897 GGCTAGAATTAGCCTCAGCAGGTCCTCAGCTATTACATGGTAACCACCAGTTATTCAATG 838 Query 7565 TTATTA-TTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATA 7623 ||||| | | ||||| | ||||||| |||||| | || ||||| | | | | Sbjct 837 -TATTAGTGGTAGGACATGCTATCCTTATGATATTCTTTCTAGTAATGCCAGGTTTAGTG 779 Query 7624 GGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCA 7683 || ||||| || || | ||| | || || | || ||||| |||||||| | ||| | Sbjct 778 GGTGGTTTTGGTAACTATTTCCTACCCCTATTAATAGGTGCCTCTGATATGTCCTTTGCT 719 Query 7684 AGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 || || || |||||| || ||| || |||| || Sbjct 718 AGACTAAATAATATATCATTCTGACTATTACCTCC 684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192525638332616