Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq185 408 4e-109 >seq185 Length=130276 Score = 408 bits (452), Expect = 4e-109 Identities = 634/895 (71%), Gaps = 17/895 (2%) Strand=Plus/Minus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| |||||| || || || |||| ||||| |||||||||||||| || |||| Sbjct 111610 AACACCAGCTTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCTAA 111551 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 ||||| ||||||||||||||||| ||||| || | || || ||||| | || Sbjct 111550 TGAAATGTTTTCCATAAAATCAAATGGATTTGTAACATTATAGAATTTTTTATTACCTAA 111491 Query 4367 AGCTACAAGCAATCGGTCAGCTACA-AATTCTATATACTGGCTCATGAGTTC-GCAGTTA 4424 ||| || | || || ||||| ||| || || | ||| || | ||| | || ||| || Sbjct 111490 AGCAACTAATAAACGATCAGC-ACAGAACTCAACATATTGACACATTAATTTAGCA-TTC 111433 Query 4425 ATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCT 4484 || || | ||| | |||| || | || ||| | || ||| || | || ||| Sbjct 111432 ATACCTAATAAAGAAGCTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAACAGCT 111373 Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544 || || || || | || | | |||| ||||||||||||| ||| | |||| ||| Sbjct 111372 TCAGTAATAATTTTTTCAACAATTTCTTCAGATGGTTTATTTTTTAAATGAGCAAATAAT 111313 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| ||||||||| ||| |||||||| || | | ||| | ||| || ||||| ||| Sbjct 111312 AAACAAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAAAAGTT 111253 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || || |||||||||||||| ||||| | |||||| || | |||||||| ||||||||| Sbjct 111252 AAACCAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAGAAAAG 111193 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAA-CGAGCTGGCTTTGTC 4723 || || ||||| || || ||||| || ||||||| ||||| |||| ||| || Sbjct 111192 AAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATAAAGCT-TCTTCATC 111134 Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 ||||||| |||| ||||| | |||||||| |||| || ||||| || | ||||| Sbjct 111133 AGCAATCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAATAGC 111074 Query 4784 GTTAAATA---ATTTA-CTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 || |||| ||| | ||| ||| ||| |||| ||||||||| || |||| || Sbjct 111073 ATTGAATAAATATTCAGCTTGTTT----TGGATCTTTAATATAAGTATCAATTAATAATG 111018 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 ||| |||| ||||| |||||||| || ||| || || || ||||| ||| |||||| Sbjct 111017 AATAAGTTTCTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTT 110958 Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959 ||| | ||||||||| | | || |||| ||||| ||||| || || ||||| || Sbjct 110957 CTGGAATTTGAACTTCAGCAGAGAAATTTTCAACTAAATTTTCATTAACAATACCATCTG 110898 Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTT- 5018 || ||||| || || ||||| || |||||| | |||| | | || | | || Sbjct 110897 AAGCAGCAAAGAAAGCTAAAACTCTTGAAATAAAGAAACGTTCATTATCATTTAATCTTT 110838 Query 5019 --TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076 ||||| | | | |||||| | |||||||| ||||||| |||||||||| || |||| Sbjct 110837 CATTCCAATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGCTT 110778 Query 5077 CCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 | |||||||| || ||| || ||| |||| | ||| || | || ||||| Sbjct 110777 CAGCTTTTTTATATGCTTGCCAGATTTCATGATATTTAATTGGGAATAAAACAAA 110723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047705501212