Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq326 111 4e-19 seq275 109 1e-18 seq292 102 2e-16 >seq326 Length=266662 Score = 111 bits (122), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||| | || || ||||||||||| |||||||| | ||| ||||| || Sbjct 240027 TCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGATAAGGTTCTACC 240086 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||||| ||| || || || || | | || || || | | || |||||||| Sbjct 240087 GTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCCTT 240146 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||||||| ||| ||| | || | |||||||| || ||||| | ||| || Sbjct 240147 GTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAACTTCTAAAGTGAT 240206 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||| || || | ||| || ||||| | ||||| ||| |||| ||| Sbjct 240207 AGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 240257 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||| | || || |||||||| |||||||| || | |||||| | || Sbjct 239799 TCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACC 239858 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || ||||| || | | || || || | | || ||||| || Sbjct 239859 ATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCTTT 239918 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||||||||| ||| || | || | | ||||||| || ||||| | |||||| Sbjct 239919 GTCTTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAACTTCTAAAGTAAT 239978 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || | ||| || ||||| | ||||| Sbjct 239979 GGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || |||||||| |||||||| || | ||| ||||| || ||||||| ||| || Sbjct 239590 GTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTTCTACCGTCTTCTAATTGTTTACCA 239649 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 ||||| || | | || || || | | || ||||| || ||||| |||||| |||| Sbjct 239650 GCGAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTTGATTTG 239709 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | | || ||| || ||||| | |||||||||||| || || | || Sbjct 239710 ACGTTATCAATAGTATCGGAAGATTCAACTTCTAAAGTAATAGTTTTACCTGTTAAGGTT 239769 Query 152088 TTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || ||||| | ||||| ||| |||| ||| Sbjct 239770 TTAACGAAAATTTGCATACCACCTCTTAATCT 239801 >seq275 Length=119121 Score = 109 bits (120), Expect = 1e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | ||| || |||||||| ||||||||||| | ||||||||| |||||||||| Sbjct 71162 ATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCTAATTG 71221 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| | | || || || | | || ||||| || ||||||||||| Sbjct 71222 TTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGAATTTT 71281 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | ||||||| | || | | | || ||| || ||||| | ||||| || || || || Sbjct 71282 TGATTTGACATTGTCAATGGTATCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGT 71341 Query 152081 GAGAGTCTTCACGAA 152095 | ||| || ||||| Sbjct 71342 TAAAGTTTTAACGAA 71356 >seq292 Length=16354 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||| | || || |||||||| ||||| ||||| | ||||||||| || Sbjct 6405 TCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTACC 6464 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || ||||| | | || || || | | || ||||| || Sbjct 6465 ATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTT 6524 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||||||| ||||||| | || | | || ||| || ||||| | ||||| Sbjct 6525 ATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAACTTCTAAGGTAAT 6584 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || | ||| || || || | ||||| || Sbjct 6585 GGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCATCTT 6623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153815418868244