Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq326 179 8e-40 seq275 154 3e-32 seq292 143 6e-29 seq331 86.0 1e-11 >seq326 Length=266662 Score = 179 bits (198), Expect = 8e-40 Identities = 165/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| || ||||||||| ||||||||||| | | || || ||||| ||| Sbjct 239806 ACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCTTCT 239865 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || || || |||||||||||||| ||| |||||||| || |||||||| Sbjct 239866 AATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGA 239925 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || | ||| ||| ||||||| ||||| || | ||| ||||| | ||| || |||||| Sbjct 239926 ATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAACTTCTAAAGTAATGGTCTTA 239985 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| |||||||| || ||||| Sbjct 239986 CCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 174 bits (192), Expect = 3e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| || |||||||||||| ||||| |||| | || | || || ||| Sbjct 240034 ACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGATAAGGTTCTACCGTCTTCT 240093 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || ||||| |||||||||||||| ||| |||||||| ||||||||||| Sbjct 240094 AATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 240153 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || |||| ||| || | || |||||||| |||| ||| ||||| | |||||| || ||| Sbjct 240154 ATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAACTTCTAAAGTGATAGTTTTA 240213 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| || ||||| || ||||| Sbjct 240214 CCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 163 bits (180), Expect = 6e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282887 AAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATC 282946 ||| |||| ||| || || ||||||||| || ||||| |||| | || | ||||| Sbjct 239346 AAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGATAAGGTTCTACCATC 239405 Query 282947 CTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTC 283006 |||| |||||| || || || || ||||||||||||||| |||||||| || || || Sbjct 239406 TTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGAATACCTTCTTTATC 239465 Query 283007 TTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 |||||| |||| ||| || | || ||||| || |||| ||| ||||| | |||||| || Sbjct 239466 TTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAACTTCTAAAGTGATAGT 239525 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||||||||| || || ||||| Sbjct 239526 TTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| || ||||||||| ||||||||||| | | || | || || ||| Sbjct 239578 ACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTTCTACCGTCTTCT 239637 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || || || || ||||||||||| || |||||||| || || |||||| Sbjct 239638 AATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGG 239697 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || |||| ||| ||| |||| ||||| || |||| ||| ||||| | ||| || || ||| Sbjct 239698 ATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACTTCTAAAGTAATAGTTTTA 239757 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || |||||||| || ||||| Sbjct 239758 CCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 123 bits (136), Expect = 5e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| || ||||||||| ||||||||||| | | || || ||||| ||| Sbjct 240262 ACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCTTCT 240321 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || ||||| |||||||||||||| || || || || || || ||||| Sbjct 240322 AATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGGATCCCTTCTTTATCTTGA 240381 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| | ||| ||| |||| |||||||| |||| ||| || Sbjct 240382 ATCTTGGATTTGACGTTATCAATAGTGTCAGAAGATTCAAC 240422 >seq275 Length=119121 Score = 154 bits (170), Expect = 3e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| || ||||||||| |||||||| |||| | || | ||||| ||| Sbjct 71157 ACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCT 71216 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || |||||||| ||||||||||| ||| |||||||| || |||||||| Sbjct 71217 AATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGA 71276 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || |||| ||| || | || || || || |||| ||| ||||| | || || |||||| Sbjct 71277 ATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAACTTCTAAGGTAATGGTCTTA 71336 Query 283071 CCCGTCAAAGTCTTAACGAA 283090 || || ||||| |||||||| Sbjct 71337 CCAGTTAAAGTTTTAACGAA 71356 >seq292 Length=16354 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955 |||||| || ||||||||| ||||| || |||| | || | ||||| |||| ||| Sbjct 6417 ATGTAATGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTACCATCTTCTAATTG 6476 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||| || |||||||| ||||||||||| ||| |||||||| || || ||||| || || Sbjct 6477 TTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTT 6536 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 || ||| || | || ||||| || |||| ||| ||||| | || || || ||||| || Sbjct 6537 TGATTTGACATTGTCAATAGTATCAGAAGATTCAACTTCTAAGGTAATGGTTTTACCTGT 6596 Query 283076 CAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| || || ||||| || Sbjct 6597 TAAAGTTTTAACAAAAATTTGCATCTT 6623 >seq331 Length=106725 Score = 86.0 bits (94), Expect = 1e-11 Identities = 164/240 (68%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 301424 TTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAG 301483 |||| || || || ||||| || | ||| | || || ||| || ||||||| | Sbjct 104378 TTAAGATTGATCCTTATATGAATATTGATGCTGGTACTATGTCACCATTAGAACATGGTG 104319 Query 301484 AAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTT 301543 |||| ||||| ||||||||| |||| | ||| | ||| | || | || ||||||| Sbjct 104318 AAGTTTTCGTTTTAAATGATGGTGGTGAAGCTGATTTAGATTTAGGTAATTATGAACGTT 104259 Query 301544 TCACTTCATTAACCCTTAAGC--GTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAA 301601 | || | || ||| | | |||| |||| |||| ||||| |||||||| | | Sbjct 104258 --ATTTAAATATTACTTTAACTCGTGATCATAATATTACTACTGGTAAAGTTTATCAACA 104201 Query 301602 AGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCA 301661 |||||| ||| |||| | ||||| ||| | || || || || ||||||||||| || Sbjct 104200 AGTTATTGAACGTGAAAGAAAAGGTGATTATTTAGGTAAAACTGTTCAAGTTGTTCCTCA 104141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046734318270056