Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq291 178 2e-39 seq154 105 9e-18 seq277 100 4e-16 >seq291 Length=72889 Score = 178 bits (196), Expect = 2e-39 Identities = 322/471 (68%), Gaps = 19/471 (4%) Strand=Plus/Plus Query 50441 TTTAGATCGTTTAGGATTTAATTACAGAAACAAAGGAGATTTAGGACCTGTTTACGGTTT 50500 ||||||| ||||| || | | | ||| |||| |||||||| || ||||| || || Sbjct 10627 TTTAGATAAATTAGGTTTAACTGATAGACGTGAAGGTGATTTAGGTCCAGTTTATGGATT 10686 Query 50501 TCAATGGAGACATTTTGGAGCGCGTTACATAAATTGCGACGTAAATTACGAAGGTCAAGG 50560 |||||||||||||| || || || | |||| || | |||| ||||||||| Sbjct 10687 CCAATGGAGACATTTCGGTGCTAAATATACTGATTGTGATGCTGATTATTCAGGTCAAGG 10746 Query 50561 CGTGGATCAACTGCAAAAAATTATAACGACGTTGAAAACAAACCCCGACGATCGGCGTAT 50620 || |||||| | || |||| | ||||||||||| || | ||||| ||||| Sbjct 10747 TGTTGATCAATTAGCTGAAGTTATTCATAAATTGAAAACAAATCCTTATGATCGTCGTAT 10806 Query 50621 TTTAATGACCGCCTGGAATCCAACCGATATAGATCAA--ACCGTTTTACCTCCGTGTCAT 50678 | ||||| | || ||||||||| | ||| | ||| | | ||||| || |||||| Sbjct 10807 TATAATGTCTGCATGGAATCCACCAGATTT--CCCAATTATGGCATTACCACCATGTCAT 10864 Query 50679 GTTTTATGTCAATTTTATG-------CCACAGACAATGT--------TTTATCCTGTCAA 50723 ||||| | |||||||||| | | | || || ||||| ||| | Sbjct 10865 GTTTTTTCACAATTTTATGTTAATTTTCCTAAAGAAGGTAAACCACAATTATCATGTTTA 10924 Query 50724 TGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCT 50783 | ||||||||||| ||||||||| | || |||||||| || | |||||||| ||| Sbjct 10925 TTATATCAAAGATCTTGCGATATGGGTCTTGGAGTTCCTTTTAATATTGCTTCTTATGCT 10984 Query 50784 TTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACG 50843 |||||||| | |||| || ||| || |||||| | || |||||||| ||||| Sbjct 10985 TTATTAACTAAAATGATTGCAAAAGTTGTTGATATGGATTGTGGTGAATTTATACATACT 11044 Query 50844 TTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGCAA 50894 | || || ||||| |||| ||||| || ||||||||||| || ||| Sbjct 11045 ATGGGTGATTCTCATGTTTATAAAGATCATGTTGATGCTTTAAAAGAACAA 11095 >seq154 Length=93191 Score = 105 bits (116), Expect = 9e-18 Identities = 379/588 (64%), Gaps = 26/588 (4%) Strand=Plus/Minus Query 155874 AAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAA-TTCCAACCG 155932 |||||||| | ||| || | |||||| |||||| |||||| | ||| || ||| || | Sbjct 40522 AAAATTTGTAAACGACCATCTTCATCTGGTAATTGAATTTCAA-CTTGAACTTCAAATCT 40464 Query 155933 CCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAA 155992 |||||||||||||| || | |||||||| || | | || |||||||| || | ||| Sbjct 40463 ACCAGGTCTTAATAAAGCATTATCAATTAAATCACGACGATTTGTCATACCAATAACTAA 40404 Query 155993 AATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTACGGCGTC 156052 || || || || || ||||| || ||||| | |||||||||||||| || || Sbjct 40403 GATATTATTCAATTGATCAACACCATCCATTTTGGCTAATAATTGATTGACAACATTATC 40344 Query 156053 ----------GT-GCGTGGCGT-TATCACCGCGTTTTTTACACAGAGCATCTATTTCATC 156100 || | | | | | ||| | || ||| | | || ||||| |||||| Sbjct 40343 ACCAACACCAGTACCATCACCTCTTGAACCTCTTTGTTTGAAAACAGAATCTAATTCATC 40284 Query 156101 GAAGACGATAACGTGTAATCCGCTGGCTAAACCCAATTT--NNNNNNNNNNNNNNNAGCC 156158 || | ||||| |||||| | | | | | ||| ||| Sbjct 40283 AAAAATGATAATATGTAAT--GAAGATTCTTCTCCTTTTGATTTATATTCAGCTTCAGCA 40226 Query 156159 TCTTGAAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCA 156218 |||| ||| || | | || |||| ||| ||| |||||||| |||| | ||| Sbjct 40225 TCTTTAAATAAATTACGAATATTTTCTTCAGATGAACCAACATATTTACTTAAAATTTCT 40166 Query 156219 GGACCGTTAACTATTTTGACGGGTCGT---GATTTAAAAGCTTG-AGCGATACAGCGAGC 156274 ||||| ||||| ||||| || || | ||| || | ||| | | || | | || Sbjct 40165 GGACCATTAACAATTTT--TGGTTCTTTTGCATTCAACA--TTGTACCAATTCTTCTTGC 40110 Query 156275 CATTAATGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACA 156334 ||||| |||||||| || || || || |||| |||| ||||| | ||| || Sbjct 40109 AATTAAAGTTTTACCAGTACCTGGTGGACCAAATAATAATAAACCTTTAACATGACTAAT 40050 Query 156335 ACCTAATTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAAT 156394 ||||||||||| | | | | || | | || ||||| ||||||| |||||| Sbjct 40049 ACCTAATTTTTGAATAACTGAAGGTGGGAAAATACGTGATGCAAAAGCTCTTCTAAAAAT 39990 Query 156395 GAGAGAAAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATT 156442 | | |||||||||||| || || || |||||||| || ||||| || Sbjct 39989 TTGTGTAAATTCTTTATCTAACCCACCAACACCCATATCTTCAAATTT 39942 >seq277 Length=184736 Score = 100 bits (110), Expect = 4e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 63733 AGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGT 63792 ||| || | ||| | ||| |||| |||||||||||||| || | | |||||||||| Sbjct 37573 AGAACTACAAAAGTTCCACAAATTGGTGATAAATTTGCCTCACGTCATGGTCAAAAAGGT 37514 Query 63793 ACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCC 63852 || |||||| | ||||| | |||||||||||||| || | ||| ||||| || || Sbjct 37513 ACTATTGGTATTACATATCGTCGTGAAGATATGCCTTTCACAAGAGAAGGTATTGTCCCA 37454 Query 63853 GATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGTT 63897 ||| | | || ||||| || ||| |||| |||||||| ||| Sbjct 37453 GATTTAATTATTAATCCTCATGCTATTCCATCACGTATGACTGTT 37409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667072164807840