Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq103 199 4e-46 >seq103 Length=1665694 Score = 199 bits (220), Expect = 4e-46 Identities = 487/731 (67%), Gaps = 14/731 (2%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||||||||||||||| | ||||| ||||| || || || || | || || || |||| Sbjct 215345 TTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTTT 215286 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 |||| || || ||||| || || || || ||| ||| || || || | | Sbjct 215285 CCATGAAGTCGAAGGGGTTGGTGGCATTGTAAAC--CTTCTCGTTACCTAGAGCAACTAA 215228 Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089 ||||||||| || ||||| || | ||||||||||| || | || || || || | | Sbjct 215227 TAATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAACAA 215168 Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 | | || | ||| | || || ||| | ||| || |||| ||||| | ||||| Sbjct 215167 ACTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGATGAT 215108 Query 16150 ATCGGTGGCTCGTGTTTCAGACGGT---GTATGGTTT--AGGTGTTTAAACATTAGACAC 16204 | || || |||| | ||| || || ||| | || || | ||||| Sbjct 215107 TT--GTTCGACGA-TTTCTG--GGTCTGGTCTGTTTTGCAAATGGGAGAATAAGAGACAT 215053 Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264 || ||||| ||| | ||||||||||||| || | ||| ||||| ||||| || ||| Sbjct 215052 GCAAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACCT 214993 Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324 |||||| |||| |||||| |||||||| || | |||||| || || |||||| ||| Sbjct 214992 GGCATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAATA 214933 Query 16325 CCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATC 16384 || ||||| | || ||||||| ||||| ||| || || |||||| |||| | |||| Sbjct 214932 CCTTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTATCATTAATC 214873 Query 16385 CATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAAC 16444 ||| || |||| || |||||| || || || ||||| || || || ||| Sbjct 214872 CATCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAGCGTTGAAC 214813 Query 16445 AATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCT 16504 || || ||||| ||| | || || | || |||| ||| ||| |||| Sbjct 214812 AAGAAGTCAGCTTCCTTTGGATCCTTGATGTATGAGTCGATCAACAAAGAGTAGGTTTCG 214753 Query 16505 GAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGT 16564 ||||| ||||| || || || || || || ||||| || || || | | ||| Sbjct 214752 GAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCAGGCACTTGA 214693 Query 16565 ACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAA 16624 ||||| | |||| ||| ||| ||| ||||| |||||||| ||| ||||| || Sbjct 214692 ACTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAGAGGCAGCGAAG 214633 Query 16625 AACGCCAATAT 16635 || ||||| || Sbjct 214632 AAAGCCAAAAT 214622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413178998120