Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq147 275 7e-69 seq103 178 2e-39 seq31 118 1e-21 >seq147 Length=818043 Score = 275 bits (304), Expect = 7e-69 Identities = 1150/1800 (64%), Gaps = 44/1800 (2%) Strand=Plus/Plus Query 53141 GGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATAC 53200 || ||||| | ||| |||||||| ||||| ||||| | || ||| || ||| ||||| Sbjct 276739 GGGTTAACAATTTGGAATTCTCCTGACAACACTCTTCTAGAGTACATGTTAGAAGTATAT 276798 Query 53201 GGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCC 53260 ||||| | | | || || || ||||| ||||||| ||| || ||||| |||||||| || Sbjct 276799 GGTTCGAAACATTCGTTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATAGGAGCA 276858 Query 53261 ACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAAT 53318 ||||| || ||||| | ||| ||||| | || || | || | || ||||| | Sbjct 276859 ACCAACAATGAGTTTCTTAAACC--ATGTTGGGCCATCTTTTGCTTCAAAGTATCCCAGT 276916 Query 53319 TCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGT 53378 ||| | || | || ||| | | ||| | | || Sbjct 276917 CCCATAATTCGGTTGGCTTTCTGTTCCACAAATCGTATTGCAACAAACCTTGAGAAGCTG 276976 Query 53379 ACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA 53438 || ||| | || | ||||| || ||||| | | || | |||| | || || | Sbjct 276977 GAGAACCTTCGTAGGATTCGTAAGGACCTTCGATAACTGCCAATTCAATAGAGGCTTCAA 277036 Query 53439 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTAT 53498 ||||||| || |||||||||||||| | |||||| || | ||||| | | Sbjct 277037 CAGCACCGTGGTAGATGGTTTCGAAGATTTGAATATTTAATTCCTTGGCTTCTTGAGAGT 277096 Query 53499 CAAATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATA 53557 | ||||| |||| | | || || || | || || || ||||| ||||| | | | || Sbjct 277097 CGAATGG-TAATCTCAAAGCCATGAAAGTATCAGCCAAACCTTGGACACCCAAAGCAATT 277155 Query 53558 GGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 53617 ||||| | || |||| || || || || |||| || || | || | || || Sbjct 277156 GGTCTGTTCTTCATATTGGATCTTCTAGACTCAGGAACTGGGTAGAAGTTTCTGTCAATG 277215 Query 53618 ATTTTATTGAGGTTTCTG---ACAA--TTAC----TTTGACCACATCCTTC--AGTTTGA 53666 ||| | || | ||||||| |||| ||| || | || | ||| |||| | Sbjct 277216 ATTCTGTTCAAGTTTCTGGTGACAACCTTAGAAATTTCGTGCAACTT-TTCGAAGTTGTA 277274 Query 53667 GAAAATCAAATTGTCCATCTATTACAA----ACATGTTCAATGCAATAGATGCCAGATTA 53722 || | | || || ||| || ||| | ||| | || |||||||| |||| ||| Sbjct 277275 CCAAGTGGAGTTTTC-ATCGGTTTCAACAAAAGATGGTAAA-GCAATAGAAGCCAAGTTA 277332 Query 53723 CAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 53782 || ||||| || || | || || | |||| | || ||| || | ||| | | Sbjct 277333 CAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACACAAGTTAGAAGAT 277392 Query 53783 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 53842 |||||| | || || || | |||||| |||| |||||||| || ||||| || | ||| Sbjct 277393 TTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCGTCCTTGTACAACATG 277452 Query 53843 AATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTT 53902 || || ||||| ||||| | || | ||| | ||| || | ||| | | || || Sbjct 277453 AAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAATTGCGTACCACAACTTCTGGGCTTTG 277512 Query 53903 ATTATAGATTTGTAT----CTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTC 53958 || | ||||| | || ||||| ||||||||| ||||| | || || Sbjct 277513 AT----GGTTTGTCTACCTCTATTTTCACTTTCGTATTTCTCGTACAAAGTCTTGAATTC 277568 Query 53959 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 54018 || || |||||| | || || || ||||| ||| | | ||| | ||| || || Sbjct 277569 ATCACCATAAACATCAGCTAAACCTGGGGCTTCATTTGGAGAGAACAAAGTCCAGTCACC 277628 Query 54019 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 54078 | | | |||| || |||||| | ||| |||||||| | ||| || | |||||| Sbjct 277629 ATTCTTTTCAACTCTTTCCATAAACAAATCTGGAATCCACAAGGCTGGGAACAAATCTCT 277688 Query 54079 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 54138 || ||| ||| || ||||| ||||||| | | |||| ||| | | |||||| || Sbjct 277689 GGCTCTGATTTCTTCTTTTCCGTGATTCTTTCTGATGTCGATGAAGTCGAAAATATCGGA 277748 Query 54139 ATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 54198 ||||| || || ||||| | || | | | ||||| | ||||| || || || || | Sbjct 277749 GTGCCATGGCTCTAAGTACAAGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGGTCGAC 277808 Query 54199 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 54258 |||||| || ||||| || | || || | ||| ||||| ||||| ||||| | ||| || Sbjct 277809 GTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAATGATACCGTTGGAAGTACCGTT 277868 Query 54259 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCC 54318 || || | || || ||| | | |||||| ||| | ||| || || || Sbjct 277869 AGTACCAGCAATGTAAGCACCAGTACTTCTAATATTGTGAATGTGCAAACCAATACCACC 277928 Query 54319 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 54378 || | || || || || || ||| || || || || || || || || ||| || Sbjct 277929 AGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGTCGTAAATACCATCGATAGAGTC 277988 Query 54379 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 54438 |||| ||||| | | ||||| ||||| || ||| ||| || ||||| || Sbjct 277989 ATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAGGACTTGGAGTACCAGCATTGAA 278048 Query 54439 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGC 54498 ||||| ||||| |||| || || || ||| ||| | | ||||| ||||| || | Sbjct 278049 CAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACATGTGGTTGTAGGTCTCAATGAC 278108 Query 54499 TGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 54557 || || || || | || || || || || || | ||| | || ||| || |||| Sbjct 278109 CTTTTCAATGTCGTCACCG-TGGATACCAACAGCAACTCTCATGATCAAGTGTTGTGGTC 278167 Query 54558 TTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 54617 | || | | || || |||| ||| ||| || ||| ||||||| || || ||||||| Sbjct 278168 TCTCGGCCACTTTACCGTCTATTCTCAACAAATACGATCTTTCCAAGGTCTTGAAACCAA 278227 Query 54618 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATT 54677 |||| ||||| |||||| || ||||| | |||| | ||||| | || | || | Sbjct 278228 AATAATTGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTTTAATTCGTTGGCATGCT 278287 Query 54678 TGTTAACTACATCCATGGTAA--TACT--TGAAATAATCGGAGAATGTTTCCCATTTTTA 54733 | | | | | |||| | || |||||| || || ||||| || || | || Sbjct 278288 TTTGGATGA----TGTTGTAAGTTTCTTCTGAAATCATGGGCGAATGCTTACCGGTCTTT 278343 Query 54734 GGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTG 54793 || || | || | | || ||||| ||| | | || | || | |||| |||| Sbjct 278344 GGGTTAATGTAATCGTACAATTCCTTGGACACCTGGGAATATTGCTTGGTGGTTTGTTTG 278403 Query 54794 TGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTA 54853 || | || || ||||| ||||| || || | |||||| || || || || || || Sbjct 278404 TGCAAGTTGGACACGGCGATTCTGGCCGCCAAAATGGCGTAGTCAGGGTGGATCGTGGT- 278462 Query 54854 CAAGT-GGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912 || || ||| || ||||||||| || ||||||| || | || || || || | ||| Sbjct 278463 CATGTAGGCCGCAGTTTCGGCTGCCAAGTTGTCCAACTCGATGGTGGTGACACCTTGATA 278522 >seq103 Length=1665694 Score = 178 bits (196), Expect = 2e-39 Identities = 591/914 (65%), Gaps = 18/914 (2%) Strand=Plus/Minus Query 23828 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 23887 || |||||| || |||||||| |||| || | ||||| || ||||| || ||||| Sbjct 215362 AGCCATAACACCGGCCTTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACC 215303 Query 23888 TTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTA 23945 | || || || ||||||||||| ||| | || ||||| |||| || | |||| | Sbjct 215302 GGCCAAGGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGTT 215243 Query 23946 AATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCA 24005 | || | || | |||||||| ||||||||||||| ||| ||||| | | Sbjct 215242 A--CCTAGAGCAACTAATAATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTA 215185 Query 24006 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAG 24065 || ||||| || | | | | ||| | ||| |||| | |||| | |||||||| Sbjct 215184 CAGTTCATACCCAACAAACTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCA 215125 Query 24066 ACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 24125 || || || || || || | || ||||| ||| | ||||| Sbjct 215124 ACAGCTTCAGTGATGATTTGTTCGACGATTTCTGGGTCTGGTCTGTTTTGCAAATGGGAG 215065 Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 || | | |||||| || || || | ||| |||||||| | ||| ||||| ||||| Sbjct 215064 AATAAGAGACATGCAAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAG 215005 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || || | || ||||||| || | || || | ||| || || || ||||| || ||| Sbjct 215004 AAAGTCAAACCTGGCATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCA 214945 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCG 24302 ||||||||| ||||| || || || || || | | |||||| || | | | || Sbjct 214944 CTAAAGAAAATACCTTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCG 214885 Query 24303 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 24362 | |||| ||||| | |||||| || || || | || | || || || || Sbjct 214884 TTATCATTAATCCATCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCG 214825 Query 24363 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 24422 ||||| || || | ||| ||| || ||| || | |||| || ||||| | | Sbjct 214824 ATAGCGTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTATGAGTCGATCAACAAA 214765 Query 24423 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 24482 || |||| || || |||||||| || ||||| || ||||||||||| | || Sbjct 214764 GAGTAGGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCT 214705 Query 24483 TCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 24542 || | | || ||||| | |||| ||| | || |||||||| || || || ||| Sbjct 214704 TCAGGCACTTGAACTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCA 214645 Query 24543 CTGGCTGCAAAAAACGCCAATACATGTTTT----ATAAAATATTTTTCG-TCTGGTGTTA 24597 ||| || || || ||||| | || | | |||| | ||||| | | || | Sbjct 214644 GAGGCAGCGAAGAAAGCCAAAA----TTCTGGAAACAAAAAACCTTTCGTTATCGTTCAA 214589 Query 24598 GT--TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 24655 | || ||||| |||| |||||||| | || | ||| || | |||||||| || Sbjct 214588 CTTGTTGTTCCAGTCATGAGTATCTTTACCCAAGTCGATTTCCTCAGCAGTCCAAAAAGA 214529 Query 24656 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 || || |||||||| ||||| | ||| || ||||| || | ||||| || | || || Sbjct 214528 GGCTTCAGCCTTTTTGTACATTTGCCAAATCTCATGGTACTTGATTGGGAACAAGACGAA 214469 Query 24716 TCTATTTGGATTTT 24729 ||| || | |||| Sbjct 214468 TCTCTTGGTGTTTT 214455 >seq31 Length=351742 Score = 118 bits (130), Expect = 1e-21 Identities = 320/476 (67%), Gaps = 18/476 (4%) Strand=Plus/Minus Query 53768 CAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 53827 || ||||| | ||||||||||||| || | ||| || || ||| | ||||| ||| Sbjct 239901 CAGAGATTTGAAGACTTGATGGTTCCCAAGTGTTGGTGGTTTGACTTCATATTACAAGCA 239842 Query 53828 TCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTC---TATAATCGCTTTC 53884 ||||| || | || | || |||||||| |||| || || |||| || | | Sbjct 239841 TCCTTGTACAACATATAGGGACCCCCAGTTTCGGTCTGAGACTCAAGTATACTC---TGC 239785 Query 53885 CAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTAT 53942 || | | ||||| | | |||| | | ||| |||| | ||||| || || Sbjct 239784 CACAACTTTTGGGCCTTAACAACC--TTTGCAGCCCTTCCTTCTTTCTCGTACCGTTCAT 239727 Query 53943 ACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCC-GGACAC 54001 |||| | |||||||||||| || || ||| || ||||| |||||| || | Sbjct 239726 ACAAGATATTAAACTCGTCTCCGTAACAATCTGACAAGCCTGGACACTCATCCGGGGTAA 239667 Query 54002 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 54061 || ||| |||| ||| ||| ||| || || | ||| || | || |||||||| || Sbjct 239666 ATAAAC-ACCAGTCTTCGTTATCTTTGACCTTCTGCATGAATAAGTCGGGAATCCAGAG- 239609 Query 54062 GCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA-TTCTTTTTAAGATCGA 54119 | ||| |||| |||||| || || || || ||||| ||| ||||| | | ||| | Sbjct 239608 TCCATAGAATAAATCTCTTGTCCTCAACTCTTCCTTTCC-GTAGTTCTTCCTCAAATC-A 239551 Query 54120 GGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGT 54178 |||| || | | ||||| ||||||||| || | |||||| | | | | || || | | Sbjct 239550 AGAACATCAAACACATCAGCATGCCACGGCTCAATGTATATAGCAAAAGCACCGGGTCTT 239491 Query 54179 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 54234 || ||||| || ||||| | ||||||||| || | ||| | ||||| | |||||| Sbjct 239490 TTATTTCCACCTTGATCAACGTATCTAGCTGTATCATTGAACACTCTAAGCATTGG 239435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720182489680