Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq180 87.8 2e-12 seq158 82.4 7e-11 >seq180 Length=546618 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580 |||||||| |||||||| | ||||| || ||||||||||||||||| || ||| | Sbjct 253053 AATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTA 252994 Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640 ||| || | || || || ||| |||| | | ||||| || || || || || ||| Sbjct 252993 CCATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATTCCTTCC 252934 Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700 |||||| ||| || ||| || | || | |||||| | || || || | || Sbjct 252933 TTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTG 252874 Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || ||||||| || || || ||||| ||||| Sbjct 252873 ATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836 >seq158 Length=604990 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580 ||||| ||||||||||| | || || || ||||| |||||||| || || ||| | Sbjct 572306 AATCTTAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTT 572365 Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640 ||| || | || || |||||| | || | | || || || || || || || ||| Sbjct 572366 CCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCC 572425 Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700 |||||| || || ||| || | || | |||||| | | |||||| || | ||| Sbjct 572426 TTGTCTTGGATCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGACTTCCAAGGTA 572485 Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || |||| || || || ||||||||||| Sbjct 572486 ATGGTCTTACCAGTCAAGGTCTTAACGAAAATCTGCAT 572523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829390124172