Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq103 181 1e-40 >seq103 Length=1665694 Score = 181 bits (200), Expect = 1e-40 Identities = 562/863 (65%), Gaps = 15/863 (2%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || |||||||||||||||||||||||||| || || || | || || || ||| Sbjct 215346 TTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTT 215287 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAAC-AA 16062 ||||| || || || || || | | | || || ||| | || | |||| || Sbjct 215286 TCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGT-TACCTAGAGCAACTAA 215228 Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122 ||||||||| || ||||| || | || || ||| || | ||||||||| || | || Sbjct 215227 TAATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAACAA 215168 Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182 | | || | || || || || | | ||||| ||| ||| |||||| |||| || Sbjct 215167 ACTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGATGAT 215108 Query 16183 ATCTCTTACTACACTATTTAACGGA--GG---GTTTAATAAGTGTTTAAACATTATACAA 16237 | | | || |||| || || |||| || || || | | ||| Sbjct 215107 TTGT-----TCGACGATTTCTGGGTCTGGTCTGTTTTGCAAATGGGAGAATAAGAGACAT 215053 Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297 ||||| || |||||| |||||||| || | || || || || || || || | |||| Sbjct 215052 GCAAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACCT 214993 Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357 ||||||| |||| ||| || | ||| || |||| ||||| |||||| |||||| ||| Sbjct 214992 GGCATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAATA 214933 Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417 |||||||| || || || || || |||| |||||| || || ||| | ||| Sbjct 214932 CCTTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTATCATTAATC 214873 Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477 ||| | |||||| | |||||| |||| ||| | || || || || || Sbjct 214872 CATCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAGCGTTGAAC 214813 Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537 || | | ||| || ||| || || | || || | ||| || |||| Sbjct 214812 AAGAAGTCAGCTTCCTTTGGATCCTTGATGTATGAGTCGATCAACAAAGAGTAGGTTTCG 214753 Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597 || || || || ||||| || || ||||| || || || | ||||| | | ||| Sbjct 214752 GAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCAGGCACTTGA 214693 Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657 ||||| | |||| |||| | |||||||| || || || ||||| || || || Sbjct 214692 ACTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAGAGGCAGCGAAG 214633 Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGT--TTTAACCAGTCA 16714 || || | || || |||| |||||||||| | || | || ||||||| Sbjct 214632 AAAGCCAAAATTCTGGAAACAAAAAACCTTTCGTTATCGTTCAACTTGTTGTTCCAGTCA 214573 Query 16715 GAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTA 16774 | |||||| || |||| || || ||||||||||||| || |||||||||| Sbjct 214572 TGAGTATCTTTACCCAAGTCGATTTCCTCAGCAGTCCAAAAAGAGGCTTCAGCCTTTTTG 214513 Query 16775 TACATTTTCCATATGTCTTCGTA 16797 ||||||| ||| || || | ||| Sbjct 214512 TACATTTGCCAAATCTCATGGTA 214490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462510895752600