Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq103 181 1e-40
>seq103
Length=1665694
Score = 181 bits (200), Expect = 1e-40
Identities = 562/863 (65%), Gaps = 15/863 (2%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || |||||||||||||||||||||||||| || || || | || || || |||
Sbjct 215346 TTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTT 215287
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAAC-AA 16062
||||| || || || || || | | | || || ||| | || | |||| ||
Sbjct 215286 TCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGT-TACCTAGAGCAACTAA 215228
Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122
||||||||| || ||||| || | || || ||| || | ||||||||| || | ||
Sbjct 215227 TAATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAACAA 215168
Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182
| | || | || || || || | | ||||| ||| ||| |||||| |||| ||
Sbjct 215167 ACTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGATGAT 215108
Query 16183 ATCTCTTACTACACTATTTAACGGA--GG---GTTTAATAAGTGTTTAAACATTATACAA 16237
| | | || |||| || || |||| || || || | | |||
Sbjct 215107 TTGT-----TCGACGATTTCTGGGTCTGGTCTGTTTTGCAAATGGGAGAATAAGAGACAT 215053
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
||||| || |||||| |||||||| || | || || || || || || || | ||||
Sbjct 215052 GCAAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACCT 214993
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||||| |||| ||| || | ||| || |||| ||||| |||||| |||||| |||
Sbjct 214992 GGCATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAATA 214933
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417
|||||||| || || || || || |||| |||||| || || ||| | |||
Sbjct 214932 CCTTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTATCATTAATC 214873
Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477
||| | |||||| | |||||| |||| ||| | || || || || ||
Sbjct 214872 CATCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAGCGTTGAAC 214813
Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537
|| | | ||| || ||| || || | || || | ||| || ||||
Sbjct 214812 AAGAAGTCAGCTTCCTTTGGATCCTTGATGTATGAGTCGATCAACAAAGAGTAGGTTTCG 214753
Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597
|| || || || ||||| || || ||||| || || || | ||||| | | |||
Sbjct 214752 GAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCAGGCACTTGA 214693
Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657
||||| | |||| |||| | |||||||| || || || ||||| || || ||
Sbjct 214692 ACTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAGAGGCAGCGAAG 214633
Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGT--TTTAACCAGTCA 16714
|| || | || || |||| |||||||||| | || | || |||||||
Sbjct 214632 AAAGCCAAAATTCTGGAAACAAAAAACCTTTCGTTATCGTTCAACTTGTTGTTCCAGTCA 214573
Query 16715 GAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTA 16774
| |||||| || |||| || || ||||||||||||| || ||||||||||
Sbjct 214572 TGAGTATCTTTACCCAAGTCGATTTCCTCAGCAGTCCAAAAAGAGGCTTCAGCCTTTTTG 214513
Query 16775 TACATTTTCCATATGTCTTCGTA 16797
||||||| ||| || || | |||
Sbjct 214512 TACATTTGCCAAATCTCATGGTA 214490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462510895752600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |