Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq147 302 4e-77 seq31 131 1e-25 seq180 125 6e-24 seq158 96.9 3e-15 >seq147 Length=818043 Score = 302 bits (334), Expect = 4e-77 Identities = 1367/2144 (64%), Gaps = 44/2144 (2%) Strand=Plus/Plus Query 22104 TCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163 ||||||| | ||||| || |||||| || || | || ||| | | ||| ||||| | Sbjct 276392 TCTTGTCAATAGTAAATTGGATGGCGGCAGCAGCAGCTTGGGTTCTCAAATAGTACATAC 276451 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223 | ||||| |||||| ||||||| |||| || || || || |||||||| || | | Sbjct 276452 CAGTCTTAAGACCCTTCTTCCAACCGTAGAAGTGCATTGAGGTCAATTTACCCATTGTTG 276511 Query 22224 GCAAGTCC---ATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGG 22280 | |||| |||| | ||| || || || ||||| || || || ||| |||| Sbjct 276512 G---GTCCTTGATGTGAATATTCAAGGATTGGGATTGATCAATGAAAGCAGCTCTGTCGG 276568 Query 22281 CGGCCATATTTATCA-ATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTG 22339 ||||||| | || | |||| || ||||||||||| ||||| |||| | || Sbjct 276569 CGGCCATGTCGATGATATGTTTTTGG-GAGATTTCCCATACCGTCTTATACAAAGCCTTG 276627 Query 22340 ATCTCTAACGGTATCGAT--TCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAAT 22397 || || || || | | || | ||| || | ||| ||||| || ||||| | Sbjct 276628 ATTTCATCTGGGAT-GTTGGTCAAACCT-TGAATGGAACCGTTGTTTGAAATGATGTTGT 276685 Query 22398 TTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCA 22457 |||| || | |||||||| | ||| | | |||||| || | || | |||| | Sbjct 276686 TTTTCATGGATTCGTTCCAAAGACCCAAATCAACCAAATCCTTCAACAAGTATGGGTTAA 276745 Query 22458 CCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGA 22517 | | ||| || || || ||||| || | | ||| ||||| || || | ||||||| Sbjct 276746 CAATTTGGAATTCTCCTGACAACACTCTTCTAGAGTACATGTTAGAAGTATATGGTTCGA 276805 Query 22518 AAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTA 22577 || |||| ||||| |||| || |||| || ||||| || ||||| || || | || | Sbjct 276806 AACATTCGTTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATAGGAGCAACCAACA 276865 Query 22578 GCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGA--GCATCGACCAGTCCCACAG 22635 |||||||| || || || | | || || ||| | | ||| ||||||||| | Sbjct 276866 ATGAGTTTCTTAAACCATGTTGGGCCATCTTTTGCTTCAAAGTATC--CCAGTCCCATAA 276923 Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCT 22695 |||| ||| | ||| ||||| |||||||||||||| || || || || Sbjct 276924 TTCGGTTGGCTTTC---TGTTCCACAAATCGTATTGCAACAAACCTTGAGAAGCTGGAGA 276980 Query 22696 GCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAAC-G 22754 |||||||| | |||||| ||||| | || | || | ||| | | || |||| | Sbjct 276981 ACCTTCGTAGGATTCGTAAGGACCTTCGATAACTGCCAATTC-AATAGAGGCTTCAACAG 277039 Query 22755 CGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGT 22814 | |||| || || || |||||||||| | || ||||| ||| | ||| Sbjct 277040 CACCGTGGTAGATGGTTTCGAAGATTTGAATATTTAATTCCTTGGCTTCTTGAGAGTCGA 277099 Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874 | || | | || || ||| | || |||| ||| || || || | | | || |||| Sbjct 277100 ATGGTAATCTCAAAGCCATGAAAGTATCAGCCAAACCTTGGACACCCAAAGCAATTGGTC 277159 Query 22875 GGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTC 22934 ||| |||| ||| || | | | ||| || | || || | || || || ||| Sbjct 277160 TGTTCTTCATATTGGATCTTCTAGACTCAGGAACTGGGTAGAAGTTTCTGTCAATGATTC 277219 Query 22935 TGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTA--AAC 22992 |||||||||||||||| |||| || | || || |||| ||| || Sbjct 277220 TGTTCAAGTTTCTGGTGACAACCTTAGAAATTTCGTGCAACTTTTCGAAGTTGTACCAAG 277279 Query 22993 GCCCGATT-------GTACAAC-AAACTTGTTGACGGCGATCGAGGCAAGATTGCATACG 23044 | || | |||| ||| || | | || || || || | || || ||| Sbjct 277280 TGGAGTTTTCATCGGTTTCAACAAAAGATGGT-AAAGCAATAGAAGCCAAGTTACAGACG 277338 Query 23045 GCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATC 23104 || || || || | | ||| || |||||||| ||| | || | | || || Sbjct 277339 GCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACACAAGTTAGAAGATTTGATG 277398 Query 23105 GTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGC 23164 | ||||| || | || ||| | || || || | |||||||| | |||| | || Sbjct 277399 ATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCGTCCTTGTACAACATGAAAGGA 277458 Query 23165 GTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGT 23224 || || || ||| || | || | || || ||||| |||| || | | | Sbjct 277459 GTACCGGTTTCGGTTTGAGCTTCCAAAATTGCGTACCACAACTTCTGGGCTTTGATGGTT 277518 Query 23225 CGCACGTACCTGCCTTCTTCC--TCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282 | ||||| || | | ||||| || | |||||| | | ||||| |||| | Sbjct 277519 TG--TCTACCTCTATTTTCACTTTCGTATTTCTCGTACAAAGTCTTGAATTCATCACCAT 277576 Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCA--CATTGAGTCATT 23340 || || || | || || | || | ||| | | | | |||| || | || || Sbjct 277577 AAACATCAGCTAAACCTGGGGCTTCATTTGGAGAGAACAAAGTCCAGTCA-CCATTC-TT 277634 Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 |||||| | | |||||| | ||| || ||||| | || ||||| || | ||| | Sbjct 277635 TTCAACTCTTTCCATAAACAAATCTGGAATCCACAAGGCTGGGAACAAATCTCTGGCTCT 277694 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | || ||||| ||| |||||| | | || | ||||| || | || | ||||| Sbjct 277695 GATTTCTTCTTTTCCGTGATTCTTTCTGATGTCGATGAAGTCGAAAATATCGGAGTGCCA 277754 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 ||||| | ||| | |||||| || || |||||||| || || || || |||||||| | Sbjct 277755 TGGCTCTAAGTACAAGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTATCT 277814 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||| ||||||||| | || || | ||| || | || ||||||||| | ||| || Sbjct 277815 GGCAGTGTTGTTGAATACCCTGACCATAGGAATGATACCGTTGGAAGTACCGTTAGTACC 277874 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | | ||| | || || ||||||| ||| ||||| || || || | Sbjct 277875 AGCAATGTAAGCACCAGTACTTCTAATATTGTGAATGTGCAAACCAATACCACCAGCACT 277934 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || |||| || ||| |||| |||||||| || || ||||| ||| || || Sbjct 277935 CTTGGAAATCAAGGCACATGTCTTCAAGGTGTCGTAAATACCATCGATAGAGTCATCCTT 277994 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | || ||||||||||| || ||||| || | | || ||| | || ||||| || Sbjct 277995 CATGGCCACCAAGAAACAAGACGACATCTGAGGACTTGGAGTACCAGCATTGAACAAGGT 278054 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || |||| || ||||||| | ||||| | ||||| || || ||| | || Sbjct 278055 TGGAGACCCGTGAGTGAAGTATCTTTGAGACATGTGGTTGTAGGTCTCAATGACCTTTTC 278114 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 |||||| || ||||| ||||| | || || | ||| |||| || ||| ||||||||| | Sbjct 278115 AATGTCGTCACCGTGGATACCAACAGCAACTCTCATGATCAAGTGTTGTGGTCTCTCGGC 278174 Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940 | |||| ||| | |||| ||| || | || || || || || |||||||| | Sbjct 278175 CACTTTACCGTCTATTCTCAACAAATACGATCTTTCCAAGGTCTTGAAACCAAAATAATT 278234 Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGAT 24000 |||||||||||||| |||| ||| || ||||| || || || |||| ||| Sbjct 278235 GTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTTTAATTCGTTGGCATGCTTTTGGAT 278294 Query 24001 GATGTTGTAATGAAAATTC-GATATCATCGGCGTTTTAACGCCGGTCTTTGGATCGATCG 24059 |||||||||| | ||| || ||||| |||| | ||||||||||| | || Sbjct 278295 GATGTTGTAA-GTTTCTTCTGAAATCATGGGCGAATGCTTACCGGTCTTTGGGTTAATGT 278353 Query 24060 CTTCATACATATCGATAATGACATCGAAAAAAGAATCTTTAGTCTCCTTGTGCAAATTAG 24119 || |||| || | || | | || | | | || | |||||||| || | Sbjct 278354 AATCGTACAATTCCTTGGACACCTGGGAATATTGCTTGGTGGTTTGTTTGTGCAAGTTGG 278413 Query 24120 ACACGGCCAATCTAGCCGCAAGCAACGAATAGTC-GGAATGATCGATGGTCATGGCCGCT 24178 ||||||| | ||| ||||| | | | ||||| || ||||| |||||||| || Sbjct 278414 ACACGGCGATTCTGGCCGCCAAAATGGCGTAGTCAGGGTGGATCG-TGGTCATGTAGGCC 278472 Query 24179 GCCGTCTCGGCGATTAGATTGTCCAATTCAGCGGTGGTCACGCC 24222 || || ||||| | |||||||| || |||||| || || Sbjct 278473 GCAGTTTCGGCTGCCAAGTTGTCCAACTCGATGGTGGTGACACC 278516 >seq31 Length=351742 Score = 131 bits (144), Expect = 1e-25 Identities = 353/529 (67%), Gaps = 12/529 (2%) Strand=Plus/Minus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| ||||| || || || || || || | ||||| || ||||| ||| |||| Sbjct 239954 CAAGGTTGCAGACAGCAGTTTCTTCCTTCGAGGAATACTCCACGATTTCACAACAGAGAT 239895 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150 | | |||| || || ||||| | ||||| || ||| || | |||||||| Sbjct 239894 TTGAAGACTTGATGGTTCCCAAGTGTTGGTGGTTTGACTTCATATTACAAGCATCCTTGT 239835 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTC-GCCACATAGTC 23209 | | ||| || || || || ||| ||| ||||| | || ||| |||||| | Sbjct 239834 ACAACATATAGGGACCCCCAGTTTCGGTCTGAGACTCAAGTATA-CTCTGCCACAACTTT 239776 Query 23210 TGAGCGTGAACA--CGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGT 23267 || || | |||| | | ||| ||| ||||||| ||||||| || ||||| | Sbjct 239775 TGGGCCTTAACAACCTTTGCAGC--CCTTCCTTCTTTCTCGTACCGTTCATACAAGATAT 239718 Query 23268 CAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC--GGACACATGAGACT 23325 ||| ||| | |||||||| || | || ||| || | | |||| || | || | || Sbjct 239717 TAAACTCGTCTCCGTAACAATCTGACAAGCCTGGACACT-CATCCGGGGTAAATAA-ACA 239660 Query 23326 CCACATTGAGTCATTTTCAACGCGTCT-CATAAAAAGATCCGGTATCCATAGAGCGTAGA 23384 ||| | || || || || | ||| ||| || | || || ||||| || | |||| Sbjct 239659 CCAGTCTTCGTTATCTTTGAC-CTTCTGCATGAATAAGTCGGGAATCCAGAGTCCATAGA 239601 Query 23385 ACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCA 23444 | | || | | | || ||| || || ||| |||||| ||||||| | || || | Sbjct 239600 ATAAATCTCTTGTCCTCAACTCTTCCTTTCCGTAGTTCTTCCTCAAATCAAGAACATCAA 239541 Query 23445 ACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGC 23504 |||| || |||||||||||||| | ||| | ||||| || || ||||| ||||| || | Sbjct 239540 ACACATCAGCATGCCACGGCTCAATGTATATAGCAAAAGCACCGGGTCTTTTATTTCCAC 239481 Query 23505 CCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCAC 23553 | ||||| ||||| | || || | ||| ||||||| ||||| ||||| Sbjct 239480 CTTGATCAACGTATCTAGCTGTATCATTGAACACTCTAAGCATTGGCAC 239432 >seq180 Length=546618 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||| |||| || || || ||||| | || |||||| | ||| Sbjct 252380 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252439 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | || ||||||||||| | || || ||||| Sbjct 252440 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252499 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||| || || || ||||||||| || ||| || ||||| ||| Sbjct 252500 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252559 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| ||||| |||||||| |||| | ||| |||| || |||| Sbjct 252560 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTA 252608 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| |||| || || || ||||| | || |||||| | ||| Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | || ||||||||||| | || || ||||| Sbjct 252668 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252727 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||| || || || ||||||||| || ||| || ||||| ||| Sbjct 252728 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252787 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| ||||| |||||||| |||| | ||| |||| || |||| Sbjct 252788 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTA 252836 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| |||| || || || ||||| | || |||||| | ||| Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | || ||||||||||| | || || |||||| Sbjct 252896 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAG 252955 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||| || || || |||||||| || ||| || ||||| ||| Sbjct 252956 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAACTTTGGCTGATTACAAC 253015 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||| ||||| || ||||| |||| | ||| |||| || || Sbjct 253016 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 253062 >seq158 Length=604990 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| |||| || || || || ||| | || || || | Sbjct 572526 AAGATGCAGATTTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCC 572467 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| | || | |||||| | || ||||||||||| | || || ||| Sbjct 572466 TCCGACACCATTGATAATGTCAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGAC 572407 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | | || |||||||| || || |||||||| | ||| || || || Sbjct 572406 CAACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGGCTGACTAC 572347 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||| ||||| |||||||| |||| | ||| |||| || ||| Sbjct 572346 AACATCCAAAAGGAATCCACTCTTCACTTGGTGTTAAGATTGAGAGGTGGT 572296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765335732720