Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq147 286 4e-72 seq103 174 2e-38 seq31 118 1e-21 >seq147 Length=818043 Score = 286 bits (316), Expect = 4e-72 Identities = 1161/1808 (64%), Gaps = 60/1808 (3%) Strand=Plus/Plus Query 62379 GGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATAC 62438 |||||||| | |||||||||||| ||||| ||||| | || ||| || ||| ||||| Sbjct 276739 GGGTTAACAATTTGGAATTCTCCTGACAACACTCTTCTAGAGTACATGTTAGAAGTATAT 276798 Query 62439 GGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCC 62498 ||||| | | || || || ||||| ||||||| ||| || ||||| |||||||| || Sbjct 276799 GGTTCGAAACATTCGTTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATAGGAGCA 276858 Query 62499 ACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGATGTTCCCAAT 62556 ||||| || ||||| | ||| ||||| | || || | || | | ||||| | Sbjct 276859 ACCAACAATGAGTTTCTTAAACC--ATGTTGGGCCATCTTTTGCTTCAAAGTATCCCAGT 276916 Query 62557 TCCAAAGATCCGACGG-------TACAACANNNNNNNNNNNATATTGTAGAATACCGTTA 62609 ||| | || | || | | ||| ||||| | | ||| | | Sbjct 276917 CCCATAATTCGGTTGGCTTTCTGTTCCACAAATCG-------TATTGCAACAAACCTTGA 276969 Query 62610 CTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTC 62669 || || ||| | || | || || || ||||| | | || | || | | Sbjct 276970 GAAGCTGGAGAACCTTCGTAGGATTCGTAAGGACCTTCGATAACTGCCAATTCAATAGAG 277029 Query 62670 GCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCC 62729 || || | ||||||| || |||||||| ||||| | |||||| || | ||||| Sbjct 277030 GCTTCAACAGCACCGTGGTAGATGGTTTCGAAGATTTGAATATTTAATTCCTTGGCTTCT 277089 Query 62730 GGGCTATCAAATGGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAAT 62788 | || ||||| |||| | | || || || | || || || ||||| ||||| | Sbjct 277090 TGAGAGTCGAATGG-TAATCTCAAAGCCATGAAAGTATCAGCCAAACCTTGGACACCCAA 277148 Query 62789 ACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAAT 62848 | | || ||||| | || |||| || || || || |||| || || | || | Sbjct 277149 AGCAATTGGTCTGTTCTTCATATTGGATCTTCTAGACTCAGGAACTGGGTAGAAGTTTCT 277208 Query 62849 ATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCACATCCTTCAG-TTTGA 62904 || || ||| | || | |||||| |||| ||| || | || | || ||| Sbjct 277209 GTCAATGATTCTGTTCAAGTTTCTGGTGACAAC--CTTAGAA-ATTTCGTGCAACTTTTC 277265 Query 62905 GAAAAT----CAAATCGCC----CATCTATTACAA----ACATGTTCAATGCAACAGATG 62952 ||| | ||| | | |||| || ||| | ||| | || |||| ||| | Sbjct 277266 GAAGTTGTACCAAGTGGAGTTTTCATCGGTTTCAACAAAAGATGGTAAA-GCAATAGAAG 277324 Query 62953 CCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGAT 63012 ||| ||||| ||||| || || | || || | |||| | || ||| || | | Sbjct 277325 CCAAGTTACAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACACAAGT 277384 Query 63013 TACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 63072 || | | ||||| | || || || | |||||| |||| |||||||| || ||||| | Sbjct 277385 TAGAAGATTTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCGTCCTTGT 277444 Query 63073 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT- 63131 | | ||||| |||||||| ||||| | |||| ||| | ||| || | ||| | ||| Sbjct 277445 ACAACATGAAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAATTGCGTACCACA--ACTT 277502 Query 63132 CGAGCCTTTATTATAGATT-TGTATCTCC--TTTCTCTTTCGTATAGAGTATACAATCGT 63188 | | |||| || | || | || ||| |||| ||||||||| ||||| Sbjct 277503 CTGGGCTTTG--ATGGTTTGTCTACCTCTATTTTCACTTTCGTATTTCTCGTACAAAGTC 277560 Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 | ||| || || || |||||| | || | || ||||| ||| | | ||| | | Sbjct 277561 TTGAATTCATCACCATAAACATCAGCTAAACCTGGGGCTTCATTTGGAGAGAACAAAGTC 277620 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308 || || || | | | |||| || |||||| | ||| |||||||| | ||| || Sbjct 277621 CAGTCACCATTCTTTTCAACTCTTTCCATAAACAAATCTGGAATCCACAAGGCTGGGAAC 277680 Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368 | |||||| | ||| ||| || ||||| ||||||| | | |||| ||| | | | Sbjct 277681 AAATCTCTGGCTCTGATTTCTTCTTTTCCGTGATTCTTTCTGATGTCGATGAAGTCGAAA 277740 Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428 ||||| || ||||| || || ||||| | ||| | | | ||||| | ||||| || || Sbjct 277741 ATATCGGAGTGCCATGGCTCTAAGTACAAGGCAAAAGCACCAGGTCTCTTGTTACCACCT 277800 Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488 || || | |||||| || ||||| || | || || | ||| ||||| |||||||| || Sbjct 277801 TGGTCGACGTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAATGATACCGTTGGAA 277860 Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548 |||| || ||||| | || || | ||| | | |||||| ||| | ||| Sbjct 277861 GTACCGTTAGTACCAGCAATGTAAGCACCAGTACTTCTAATATTGTGAATGTGCAAACCA 277920 Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608 || || || || | || || || || || ||| || || ||||| || || || || Sbjct 277921 ATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGTCGTAAATACCATCG 277980 Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668 || ||||| ||||| | | ||||| ||||| || ||| | ||| || Sbjct 277981 ATAGAGTCATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAGGACTTGGAGTACCA 278040 Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728 ||||| || ||||| ||||| |||| || || || ||| ||| | | ||||| ||| Sbjct 278041 GCATTGAACAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACATGTGGTTGTAGGTC 278100 Query 63729 TCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63787 ||||| | || || || || | || || || || || || | ||| | || ||| Sbjct 278101 TCAATGACCTTTTCAATGTCGTCACCG-TGGATACCAACAGCAACTCTCATGATCAAGTG 278159 Query 63788 CTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63847 || ||||| || | | ||| || |||| ||||||| || ||| ||||||| || || Sbjct 278160 TTGTGGTCTCTCGGCCACTTTACCGTCTATTCTCAACAAATACGATCTTTCCAAGGTCTT 278219 Query 63848 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATC 63907 ||||||||||| ||||| |||||| || ||||| | |||| |||| || | | | Sbjct 278220 GAAACCAAAATAATTGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTTTAATTCGTT 278279 Query 63908 CTTATATTTGTTAACTATATCCATGGTAA--TACT--TGAAATAATCGGAGAATGTTTCC 63963 || || | | || | |||| | || |||||| || || ||||| || | Sbjct 278280 GGCATGCTTTTGGATGAT----GTTGTAAGTTTCTTCTGAAATCATGGGCGAATGCTTAC 278335 Query 63964 CATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttG 64023 | | || || |||| || | | | || |||| ||| | | || | || | | Sbjct 278336 CGGTCTTTGGGTTAATGTAATCGTACAATTCCTTGGACACCTGGGAATATTGCTTGGTGG 278395 Query 64024 TTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTT 64083 ||| ||||| | || || | ||| |||||||| || | |||||| || || || || Sbjct 278396 TTTGTTTGTGCAAGTTGGACACGGCGATTCTGGCCGCCAAAATGGCGTAGTCAGGGTGGA 278455 Query 64084 GTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACT 64142 || || || || ||| || |||||||||||| ||||||| || | || || || Sbjct 278456 TCGTGGT-CATGTAGGCCGCAGTTTCGGCTGCCAAGTTGTCCAACTCGATGGTGGTGACA 278514 Query 64143 CCATTATA 64150 || | ||| Sbjct 278515 CCTTGATA 278522 >seq103 Length=1665694 Score = 174 bits (192), Expect = 2e-38 Identities = 583/904 (64%), Gaps = 14/904 (2%) Strand=Plus/Minus Query 33275 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33334 || |||||| || |||||||| |||| || | ||||| || ||||| || || || Sbjct 215362 AGCCATAACACCGGCCTTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACC 215303 Query 33335 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAA 33394 |||| || || ||||||||||| || || || ||||| ||||||||| || | Sbjct 215302 GGCCAAGGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGTT 215243 Query 33395 TCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACA 33454 || | || | |||||||| ||||| || || | ||| ||||| | ||| Sbjct 215242 ACCTAGAGCAACTAATAATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACA 215183 Query 33455 ATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATAC 33514 ||||| || | | | | ||| | ||| |||| | |||| | |||||| | || Sbjct 215182 GTTCATACCCAACAAACTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAAC 215123 Query 33515 CGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAA 33574 || | || || || | ||| ||||| ||| | | ||||| || Sbjct 215122 AGCTTCAGTGATGATTTGTTCGACGATTTCTGGGTCTGGTCTGTTTTGCAAATGGGAGAA 215063 Query 33575 CATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAA 33634 | | |||||| || || |||| ||| |||||||| | ||| ||||| || || || Sbjct 215062 TAAGAGACATGCAAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAA 215003 Query 33635 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGA 33694 || | || ||||||| || | || || | ||| || || ||||| || || || Sbjct 215002 AGTCAAACCTGGCATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACT 214943 Query 33695 AAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCT 33751 |||||| || ||||| || ||||| || || | | ||| || || | | | || | Sbjct 214942 AAAGAAAATACCTTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTT 214883 Query 33752 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811 |||| ||||| | |||||| || || || | || | || || ||||| || Sbjct 214882 ATCATTAATCCATCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGAT 214823 Query 33812 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33871 || || || | ||| ||| || ||| || | || | |||||||| | | Sbjct 214822 AGCGTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTATGAGTCGATCAACAAAGA 214763 Query 33872 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33931 || |||| || || |||||||| || || || || ||||||||||| | || || Sbjct 214762 GTAGGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTC 214703 Query 33932 GGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACT 33991 | | || ||||| | | |||| ||| | || |||||||| || || |||||| Sbjct 214702 AGGCACTTGAACTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAGA 214643 Query 33992 GGCTGCAAAAAACGCCAATACATGTTTT----ATAAAATATTTTTCG-TCTGGTGTTAGT 34046 ||| || || || ||||| | || | | |||| | ||||| | | || | | Sbjct 214642 GGCAGCGAAGAAAGCCAAAA----TTCTGGAAACAAAAAACCTTTCGTTATCGTTCAACT 214587 Query 34047 --TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 34104 || ||||| |||| |||||||| | || | ||| || | |||||||| || | Sbjct 214586 TGTTGTTCCAGTCATGAGTATCTTTACCCAAGTCGATTTCCTCAGCAGTCCAAAAAGAGG 214527 Query 34105 CCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATC 34164 | || |||||||| ||||| | ||| || ||||| || | ||||||||| | || |||| Sbjct 214526 CTTCAGCCTTTTTGTACATTTGCCAAATCTCATGGTACTTGATTGGGAACAAGACGAATC 214467 Query 34165 TATT 34168 | || Sbjct 214466 TCTT 214463 >seq31 Length=351742 Score = 118 bits (130), Expect = 1e-21 Identities = 320/476 (67%), Gaps = 18/476 (4%) Strand=Plus/Minus Query 63006 CAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 63065 || ||||| | ||||||| ||||| || | ||| || || ||| | ||||| ||| Sbjct 239901 CAGAGATTTGAAGACTTGATGGTTCCCAAGTGTTGGTGGTTTGACTTCATATTACAAGCA 239842 Query 63066 TCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC---TATAATCGCTTTC 63122 ||||| || | || | ||| |||||||| ||||||| || |||| || | | Sbjct 239841 TCCTTGTACAACATATAGGGACCCCCAGTTTCGGTCTGAGACTCAAGTATACTC---TGC 239785 Query 63123 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCT--TTCTCTTTCGTATAGAGTAT 63180 || | | | ||||| | | |||| | | | | |||| | ||||| | || Sbjct 239784 CACAACTTTTGGGCCTTAACAACC--TTTGCAGCCCTTCCTTCTTTCTCGTACCGTTCAT 239727 Query 63181 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCC-GGACAC 63239 |||| | ||||||||||| || || ||| | ||||| |||||| || | Sbjct 239726 ACAAGATATTAAACTCGTCTCCGTAACAATCTGACAAGCCTGGACACTCATCCGGGGTAA 239667 Query 63240 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63299 || ||| |||| ||| ||| ||| || || | ||| || | || |||||||| || Sbjct 239666 ATAAAC-ACCAGTCTTCGTTATCTTTGACCTTCTGCATGAATAAGTCGGGAATCCAGAG- 239609 Query 63300 GCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTA-TTCTTTTTAAGATCGA 63357 | ||| |||| ||||||||| || || || ||||| ||| ||||| | | ||| | Sbjct 239608 TCCATAGAATAAATCTCTTGTCCTCAACTCTTCCTTTCC-GTAGTTCTTCCTCAAATC-A 239551 Query 63358 GGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63416 |||| || | | ||||| ||||||||| || | |||||| || | | | || || | | Sbjct 239550 AGAACATCAAACACATCAGCATGCCACGGCTCAATGTATATAGCAAAAGCACCGGGTCTT 239491 Query 63417 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 || ||||| || ||||| | ||||||||| || | ||| | ||||| | |||||| Sbjct 239490 TTATTTCCACCTTGATCAACGTATCTAGCTGTATCATTGAACACTCTAAGCATTGG 239435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816096310480