Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq180 96.9 3e-15
seq147 91.5 1e-13
>seq180
Length=546618
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| || |||| || | ||| || ||||||| ||||| || ||||||||||| |||||
Sbjct 253065 TGTCCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCA 253006
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|| || || ||||| | || ||||| || |||||| | |||||| || ||
Sbjct 253005 GCCAAAGTTCTACCATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGT 252946
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTC 139713
|| || ||||| ||||| ||| | || | ||| | | || | ||||||| | ||
Sbjct 252945 GGAATTCCTTCCTTGTC-TTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTC 252887
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || | || | ||||| |||||||| || || ||||| |||||||||
Sbjct 252886 AACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCATA 252835
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||| ||||||| || || || ||||||||||| ||||| |
Sbjct 252834 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252775
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| | || ||||| || |||||| | ||| || || || ||
Sbjct 252774 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252715
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| | || | ||| | | || | ||||||| | || ||
Sbjct 252714 ATTCCTTCCTTGTC-TTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252656
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||| |||||||| || || ||||| |||||||||
Sbjct 252655 TTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCATA 252607
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||| ||||||| || || || ||||||||||| ||||| |
Sbjct 252606 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252547
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| | || ||||| || |||||| | ||| || || || ||
Sbjct 252546 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252487
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| | || | ||| | | || | ||||||| | || ||
Sbjct 252486 ATTCCTTCCTTGTC-TTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252428
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | ||||| || ||||| ||||| ||||| ||||||||
Sbjct 252427 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 252380
>seq147
Length=818043
Score = 91.5 bits (100), Expect = 1e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 153633 GCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTCC 153692
||||| || |||||||| || |||||| ||| || ||| | | |||| || |||||
Sbjct 277315 GCAATAGAAGCCAAGTTACAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCA 277374
Query 153693 GCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTTTGCGGTTACAA 153752
|||||| || |||| || | || | || |||||||| | || |||||||
Sbjct 277375 CAACACAAGTTAGAAGATTTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAA 277434
Query 153753 GCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAAT 153805
||||||||||| | |||| | || || |||||||||| |||| ||| | |||
Sbjct 277435 GCGTCCTTGTACAACATGAAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAAT 277487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496062815647200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |