Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq103 210 2e-49 >seq103 Length=1665694 Score = 210 bits (232), Expect = 2e-49 Identities = 491/732 (67%), Gaps = 14/732 (2%) Strand=Plus/Minus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || ||||||||||| ||||||||||| || || ||||| ||| || || ||| Sbjct 215346 TTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTT 215287 Query 13641 TCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 13700 ||||| || || || || || | | | | || || || |||||| | | || | Sbjct 215286 TCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGTTACCTAGAGCAACTAAT 215227 Query 13701 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13760 ||||||||||| | |||||| | |||||| |||| || | ||| |||||||| | | Sbjct 215226 AATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAACAAA 215167 Query 13761 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATA 13820 | | || | || || || |||| ||||| |||| ||||| || | || || Sbjct 215166 CTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGATGAT- 215108 Query 13821 ATTGTAATA--ATCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGC 13876 |||| | || || | | | | |||| | ||| || | | ||| || Sbjct 215107 -TTGTTCGACGATTTC--TGGGTCTGGTCTGTTTTGCAAATGGGAGAATAAGAGACATGC 215051 Query 13877 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 13936 ||| || ||| | || || ||||| | ||| | ||| || || || || || ||||| Sbjct 215050 AAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACCTGG 214991 Query 13937 CATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCC 13996 ||| || |||| ||| || ||||| || || | |||||| || || |||||| || || Sbjct 214990 CATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAATACC 214931 Query 13997 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCA 14056 ||||| ||||| || || | ||||| ||| || ||| | || | || | ||||| Sbjct 214930 TTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTATCATTAATCCA 214871 Query 14057 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 | | |||||| |||| |||| | ||||| || ||||| ||||| || || || Sbjct 214870 TCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAGCGTTGAACAA 214811 Query 14117 ATATTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14173 | || |||| |||| | | ||||| |||||| || || | || || |||| Sbjct 214810 GAAGTCAGCTTC-CTTTGGATCCTTGA--TGTATGAGTCGATCAACAAAGAGTAGGTTTC 214754 Query 14174 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTG 14233 ||||| ||||||||||| || || ||||| || || || | ||||| | | ||| Sbjct 214753 GGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCAGGCACTTG 214694 Query 14234 TACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14293 ||||| | |||| |||| |||| |||||||| || ||||||||| || || || Sbjct 214693 AACTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAGAGGCAGCGAA 214634 Query 14294 AAATGCCAATAT 14305 || ||||| || Sbjct 214633 GAAAGCCAAAAT 214622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479726854649400