Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq103 210 2e-49
>seq103
Length=1665694
Score = 210 bits (232), Expect = 2e-49
Identities = 491/732 (67%), Gaps = 14/732 (2%)
Strand=Plus/Minus
Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640
||||| || ||||||||||| ||||||||||| || || ||||| ||| || || |||
Sbjct 215346 TTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTT 215287
Query 13641 TCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 13700
||||| || || || || || | | | | || || || |||||| | | || |
Sbjct 215286 TCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGTTACCTAGAGCAACTAAT 215227
Query 13701 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13760
||||||||||| | |||||| | |||||| |||| || | ||| |||||||| | |
Sbjct 215226 AATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAACAAA 215167
Query 13761 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATA 13820
| | || | || || || |||| ||||| |||| ||||| || | || ||
Sbjct 215166 CTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGATGAT- 215108
Query 13821 ATTGTAATA--ATCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGC 13876
|||| | || || | | | | |||| | ||| || | | ||| ||
Sbjct 215107 -TTGTTCGACGATTTC--TGGGTCTGGTCTGTTTTGCAAATGGGAGAATAAGAGACATGC 215051
Query 13877 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 13936
||| || ||| | || || ||||| | ||| | ||| || || || || || |||||
Sbjct 215050 AAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACCTGG 214991
Query 13937 CATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCC 13996
||| || |||| ||| || ||||| || || | |||||| || || |||||| || ||
Sbjct 214990 CATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAATACC 214931
Query 13997 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCA 14056
||||| ||||| || || | ||||| ||| || ||| | || | || | |||||
Sbjct 214930 TTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTATCATTAATCCA 214871
Query 14057 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116
| | |||||| |||| |||| | ||||| || ||||| ||||| || || ||
Sbjct 214870 TCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAGCGTTGAACAA 214811
Query 14117 ATATTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14173
| || |||| |||| | | ||||| |||||| || || | || || ||||
Sbjct 214810 GAAGTCAGCTTC-CTTTGGATCCTTGA--TGTATGAGTCGATCAACAAAGAGTAGGTTTC 214754
Query 14174 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTG 14233
||||| ||||||||||| || || ||||| || || || | ||||| | | |||
Sbjct 214753 GGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCAGGCACTTG 214694
Query 14234 TACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAA 14293
||||| | |||| |||| |||| |||||||| || ||||||||| || || ||
Sbjct 214693 AACTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAGAGGCAGCGAA 214634
Query 14294 AAATGCCAATAT 14305
|| ||||| ||
Sbjct 214633 GAAAGCCAAAAT 214622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479726854649400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |