Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq103 212 6e-50 >seq103 Length=1665694 Score = 212 bits (234), Expect = 6e-50 Identities = 489/730 (67%), Gaps = 10/730 (1%) Strand=Plus/Minus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||||||||||| |||||||| || || || ||||| ||| || || ||| Sbjct 215346 TTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTT 215287 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488 ||||| || ||||| || || || | | | || || || |||||| | | |||| Sbjct 215286 TCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGTTACCTAGAGCAACTAAT 215227 Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548 ||||||||||| | |||||| | |||||| |||| || | ||| |||||||| | | Sbjct 215226 AATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAACAAA 215167 Query 13549 TTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 13608 | | || | || ||| || |||| ||||| |||| ||||| || | || || Sbjct 215166 CTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGATGATT 215107 Query 13609 ATCTTAATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCAA 13666 | | || || | | | | |||| | ||| || | | ||| |||| Sbjct 215106 TGTTCGACGATTTC--TGGGTCTGGTCTGTTTTGCAAATGGGAGAATAAGAGACATGCAA 215049 Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726 | || ||| | || || ||||| | ||| | ||| || || || || || ||||||| Sbjct 215048 AGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACCTGGCA 214989 Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786 | || |||| ||| || ||||| || || | ||| || || || |||||| || || | Sbjct 214988 TTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAATACCTT 214929 Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATT 13846 |||| ||||| || || | || || ||| || ||| | || | || | |||||| Sbjct 214928 CAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTATCATTAATCCATC 214869 Query 13847 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAAT 13906 | |||||| |||| |||| | ||||| || |||||||| || ||||| || Sbjct 214868 TCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAGCGTTGAACAAGA 214809 Query 13907 GTTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 13963 || |||| |||| | | ||||| |||||| || || | || || |||| | Sbjct 214808 AGTCAGCTTC-CTTTGGATCCTTGA--TGTATGAGTCGATCAACAAAGAGTAGGTTTCGG 214752 Query 13964 AGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14023 |||| |||||||| || || || ||||| || ||||| | ||||| | | ||| | Sbjct 214751 AGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCAGGCACTTGAA 214692 Query 14024 CCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAA 14083 | || | |||| |||| ||||||||||||| || ||||||||| || || || | Sbjct 214691 CTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAGAGGCAGCGAAGA 214632 Query 14084 ATGCCAATAT 14093 | ||||| || Sbjct 214631 AAGCCAAAAT 214622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587657369240