Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq147 293 3e-74 seq103 174 2e-38 seq31 143 4e-29 >seq147 Length=818043 Score = 293 bits (324), Expect = 3e-74 Identities = 805/1219 (66%), Gaps = 16/1219 (1%) Strand=Plus/Plus Query 71695 AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATT 71754 || |||| ||| |||| ||||| ||||| || || | || || | |||| | |||| Sbjct 277312 AAAGCAATAGAAGCCAAGTTACAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATT 277371 Query 71755 TCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 71814 ||| || | ||| | | |||||| | || || || | |||||| |||| |||||| Sbjct 277372 TCACAACACAAGTTAGAAGATTTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTA 277431 Query 71815 CACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 71874 || || ||||| || | || || |||||||| ||||| | |||| ||| | ||| || Sbjct 277432 CAAGCGTCCTTGTACAACATGAAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAATTGCG 277491 Query 71875 TTCCAGA-CGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGT-- 71931 | ||| | | || | || || || | | | ||| ||||| |||||||||| Sbjct 277492 TACCACAACTTCTGG-GCTTTGATGGTTTGTCTACCTCTATTTTCACTTTCGTATTTCTC 277550 Query 71932 GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGA 71991 ||| | | || | ||| || || || || ||| |||| || || |||||| ||| Sbjct 277551 GTACAAAGTCTT--GAATTCATCACCATAAACATCAGCTAAACCTGGGGCTTCATTTGGA 277608 Query 71992 CACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGAGATCAGGAATCC 72049 | | ||| | ||| || |||| || ||| |||| || |||||| | ||| ||||||| Sbjct 277609 GAGAACAAAGTCCAGTCACCAT--TCTTTTCAACTCTTTCCATAAACAAATCTGGAATCC 277666 Query 72050 AAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT 72109 | | ||| || | |||||||| ||| || || ||||| ||||||| | | | Sbjct 277667 ACAAGGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTTCCGTGATTCTTTCTGATGT 277726 Query 72110 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCC 72169 ||| ||| | | |||||| || ||||| || || ||||| | ||| | | | || || | Sbjct 277727 CGATGAAGTCGAAAATATCGGAGTGCCATGGCTCTAAGTACAAGGCAAAAGCACCAGGTC 277786 Query 72170 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 72229 ||||| || || || || | |||||| || ||||| || | || || | ||| |||| Sbjct 277787 TCTTGTTACCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAA 277846 Query 72230 TAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGC 72289 | ||||| ||||| | ||| || || || | || || ||| | | ||||||| Sbjct 277847 TGATACCGTTGGAAGTACCGTTAGTACCAGCAATGTAAGCACCAGTACTTCTAATATTGT 277906 Query 72290 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 72349 ||| | ||| || || || || | || || || || || ||| || || || | Sbjct 277907 GAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGT 277966 Query 72350 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 72409 | || || || || ||| |||||| ||||| | | ||||| ||||| || Sbjct 277967 CGTAAATACCATCGATAGAGTCATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAG 278026 Query 72410 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA 72469 ||| ||| || ||||| || ||||| ||||| |||| || || || ||| ||||| Sbjct 278027 GACTTGGAGTACCAGCATTGAACAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACA 278086 Query 72470 GTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATGTATTCCTACCGCGACA 72528 | ||||| |||||||| | ||| || || || | || || || || || || Sbjct 278087 TGTGGTTGTAGGTCTCAATGACCTTTTCAATGTCGTCACCG-TGGATACCAACAGCAACT 278145 Query 72529 CGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGAT 72588 | ||| | || || || ||||| || | | || | |||| ||||||| || ||| Sbjct 278146 CTCATGATCAAGTGTTGTGGTCTCTCGGCCACTTTACCGTCTATTCTCAACAAATACGAT 278205 Query 72589 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 72648 ||||||| || || ||||||||||| ||||| |||||| || ||||| | |||| || Sbjct 278206 CTTTCCAAGGTCTTGAAACCAAAATAATTGTAGTTAAAGTCACGGTCGTACACAATAGCC 278265 Query 72649 GAATTGAGTTTATCCTTATATTTGTTAACTAT-ATCCATGGTGATACTTGAAATAATCGG 72707 || || | || | || || | | || | | | | | | |||||| || || Sbjct 278266 GAGTTTAATTCGTTGGCATGCTTTTGGATGATGTTGTAAGTTTCTTC-TGAAATCATGGG 278324 Query 72708 AGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAA 72767 ||||| || || | || || |||| || | | | || |||| ||| | | | Sbjct 278325 CGAATGCTTACCGGTCTTTGGGTTAATGTAATCGTACAATTCCTTGGACACCTGGGAATA 278384 Query 72768 TAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATA 72827 | | || | |||| ||||| | || || ||||| |||||||| || | |||||| || Sbjct 278385 TTGCTTGGTGGTTTGTTTGTGCAAGTTGGACACGGCGATTCTGGCCGCCAAAATGGCGTA 278444 Query 72828 ATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTA 72886 || || || || || || || ||| || |||| ||||||| ||||||| || | Sbjct 278445 GTCAGGGTGGATCGTGGT-CATGTAGGCCGCAGTTTCGGCTGCCAAGTTGTCCAACTCGA 278503 Query 72887 CCGTTGTTACTCCATTATA 72905 || || || || | ||| Sbjct 278504 TGGTGGTGACACCTTGATA 278522 >seq103 Length=1665694 Score = 174 bits (192), Expect = 2e-38 Identities = 582/904 (64%), Gaps = 14/904 (2%) Strand=Plus/Minus Query 41758 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCC 41817 || |||||| || |||||||| |||| || | ||||| || ||||| ||||| || Sbjct 215362 AGCCATAACACCGGCCTTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACC 215303 Query 41818 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 41877 |||| || || ||||||||||| || || || ||||| |||| |||| || | Sbjct 215302 GGCCAAGGAGATGTTTTCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGTT 215243 Query 41878 TCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACA 41937 || | || | |||||||| |||| || || | ||| ||||| | ||| Sbjct 215242 ACCTAGAGCAACTAATAATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACA 215183 Query 41938 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 41997 ||||| || | | | | ||| | ||| |||| | |||| | |||||||| || Sbjct 215182 GTTCATACCCAACAAACTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAAC 215123 Query 41998 CGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAA 42057 || || || || || | || ||||| ||| | ||||| || Sbjct 215122 AGCTTCAGTGATGATTTGTTCGACGATTTCTGGGTCTGGTCTGTTTTGCAAATGGGAGAA 215063 Query 42058 CATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAA 42117 | | |||||| || || |||| ||| || ||||| | ||| ||||| ||||| || Sbjct 215062 TAAGAGACATGCAAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAA 215003 Query 42118 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGA 42177 || | || ||||||| || | || || | ||| || ||||| ||||| || ||| Sbjct 215002 AGTCAAACCTGGCATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACT 214943 Query 42178 AAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGT- 42236 |||||| || ||||| || || || || || | | ||| || || | ||| || Sbjct 214942 AAAGAAAATACCTTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTT 214883 Query 42237 --CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294 ||| ||||| | |||||| || || || | || | || || ||||| || Sbjct 214882 ATCATTAATCCATCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGAT 214823 Query 42295 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACT 42354 || || || | ||| ||| || ||| || | |||| |||||||| | | Sbjct 214822 AGCGTTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTATGAGTCGATCAACAAAGA 214763 Query 42355 ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTC 42414 || |||| || || |||||||| || || || || ||||||||||| |||| || Sbjct 214762 GTAGGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTC 214703 Query 42415 GGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACT 42474 | || || ||||| | | |||| |||| | || ||||| || || || || ||| Sbjct 214702 AGGCACTTGAACTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAGA 214643 Query 42475 GGCTGCAAAAAACGCCAATACATGTTTT----ATAAAATATTTTTCGTCCGGTGTTAA-- 42528 ||| || || || ||||| | || | | |||| | |||||| | || Sbjct 214642 GGCAGCGAAGAAAGCCAAAA----TTCTGGAAACAAAAAACCTTTCGTTATCGTTCAACT 214587 Query 42529 -TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATG 42587 || ||||| |||| |||||||| | || | ||| || | |||||||| || | Sbjct 214586 TGTTGTTCCAGTCATGAGTATCTTTACCCAAGTCGATTTCCTCAGCAGTCCAAAAAGAGG 214527 Query 42588 CTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATC 42647 |||| |||||||| ||||| | ||| || ||||| || | |||||||| | || |||| Sbjct 214526 CTTCAGCCTTTTTGTACATTTGCCAAATCTCATGGTACTTGATTGGGAACAAGACGAATC 214467 Query 42648 TATT 42651 | || Sbjct 214466 TCTT 214463 >seq31 Length=351742 Score = 143 bits (158), Expect = 4e-29 Identities = 740/1149 (64%), Gaps = 66/1149 (6%) Strand=Plus/Minus Query 71506 AAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTA 71565 |||||| ||| |||| || | ||||||||| ||||| | | ||||||||||| ||| Sbjct 240168 AAGAGAGCAAAAACGTCGGCAAGTCCTTGAACACCAATGGCCACTGGTCTGTGTCTTTTA 240109 Query 71566 TTAGAAA---TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 71622 || || | || || ||| | | ||||| ||| ||| |||||||||| ||| Sbjct 240108 TTGGATAGCCTTGCACTTTC--GTCT-GGATAGCTCGTAACATCAATAATTTTATCAAGA 240052 Query 71623 TTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT----------CT 71672 || | ||| |||||| || | | |||||| ||||||||| || Sbjct 240051 TTCTTCCCTAAAACTTTGGTTACTTTATGAAGTTTGGTGAAATCAAATTCAACGCTGTCT 239992 Query 71673 CC--CATCTATTAC-AAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGC---TAC 71726 | | ||| | | ||| | | | ||| |||| ||| | || || || || || | | Sbjct 239991 TCATCTTCTTTGATGAAAGATGGTAAAGCCAAC-GATCCAAGGTTGCAGACAGCAGTTTC 239933 Query 71727 CTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCC 71786 || || | || ||| | | |||||| || ||||| | ||||||||||||| Sbjct 239932 TTCCTTCGA---GGAATACTCCACGATTTCACAACAGAGATTTGAAGACTTGATGGTTCC 239876 Query 71787 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACC 71846 || | ||| || || ||| | ||||| |||||||| || | ||| | ||| || Sbjct 239875 CAAGTGTTGGTGGTTTGACTTCATATTACAAGCATCCTTGTACAACATATAGGGACCCCC 239816 Query 71847 AGTTTCAATCTGAGATTC---TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATT 71903 |||||| ||||||| || |||| || | ||| | | | ||||| | | || Sbjct 239815 AGTTTCGGTCTGAGACTCAAGTATACTC---TGCCACAACTTTTGGGCCTTAACAACCTT 239759 Query 71904 CTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAA 71961 || | | ||| |||| | ||||| || ||| || | ||||||||||| || Sbjct 239758 --TGCAGCCCTTCCTTCTTTCTCGTACCGTTCATACAAGATATTAAACTCGTCTCCGTAA 239701 Query 71962 GCAT-TGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATT 72020 || || | || || ||||| |||| ||| | || |||| ||| | | ||| || Sbjct 239700 CAATCTGAC-AAGCCTGGACACTCATCCGGGGTAAATAAACACCAGTCTTCGTTATCTTT 239642 Query 72021 TACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTAT 72079 || | ||| || | || |||||||| || | ||| |||| |||||| || || Sbjct 239641 GACCTTCTGCATGAATAAGTCGGGAATCCAGAG-TCCATAGAATAAATCTCTTGTCCTCA 239583 Query 72080 GCTCCTCGTTTCCTGTA-TTCTTTTTAAGATCGAGGAACGCCATA-ATATCAGAATGCCA 72137 ||| || ||||| ||| ||||| | | ||| | |||| || | | ||||| |||||| Sbjct 239582 ACTCTTCCTTTCC-GTAGTTCTTCCTCAAATC-AAGAACATCAAACACATCAGCATGCCA 239525 Query 72138 CGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCT 72197 ||| || | |||||| || | | | || || | ||| ||||| || ||||| | |||||| Sbjct 239524 CGGCTCAATGTATATAGCAAAAGCACCGGGTCTTTTATTTCCACCTTGATCAACGTATCT 239465 Query 72198 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCC 72257 ||| || | ||| | ||||| | |||||| | | ||| | || | || ||| Sbjct 239464 AGCTGTATCATTGAACACTCTAAGCATTGGCACCAATCCACTAGA-----CTTTCCTCCA 239410 Query 72258 GGA---GATAT---AGCTTCCACTGGCACGAATATTG-CTAATTGATAGACCTATTCCCC 72310 | | ||||| ||| ||||| || || |||||| || || || || || || | Sbjct 239409 GAAGAGGATATCGAAGC-ACCACTTGCTCGTATATTGTGTACGTGCAAG-CCGATACCAC 239352 Query 72311 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 72370 | | || || || | ||| | | ||| || | ||| || || || || || Sbjct 239351 CAGAAGCCTTGGAAATCATTGCTGTTTTATGTAAGGTCTTATAAATTCCATCAATTGAAT 239292 Query 72371 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC---GA-CTAGTTCCCGCA 72426 | || |||| | | |||| ||| ||| | || || || | || || ||| Sbjct 239291 CCTCTTCCATGGCCA--ACAAAA-AGCAAGAACTCAAGT-ACTTTGAGTTGGTGCCAGCA 239236 Query 72427 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCA 72486 || || || |||||||||||||| | || | || | |||| | | ||| |||||| Sbjct 239235 TTGAACAATGTAGGAGAAGCGTGGATGAAATACTTCTGGGACATCAAGTGGTAGGTCTCA 239176 Query 72487 ATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGA 72546 ||||| || |||| ||| || || | || || | ||| || | || ||| Sbjct 239175 ATAGCATCATCGATATTATCACCATGAATACCAAGAGCCACCCTCATAAAAAGATACTGC 239116 Query 72547 GGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 72606 || |||||| | | || | ||| ||| | | |||||| || || |||||||| || | | Sbjct 239115 GGGCTTTCAGCCACCTCTTCATTGATTCTGATCAAGTAAGACTTCTCCAAAGTCTTGATA 239056 Query 72607 CCAAAATAG 72615 ||||||||| Sbjct 239055 CCAAAATAG 239047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137597655160