Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq103 127 3e-24 >seq103 Length=1665694 Score = 127 bits (140), Expect = 3e-24 Identities = 569/888 (64%), Gaps = 29/888 (3%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || |||| ||| ||||| |||||| ||||||||||||||||| | ||||| |||| Sbjct 214476 TGTTCCCAATCAAGTACCATGAGATTTGGCAAATGTACAAAAAGGCTGAAGCCTCTTTTT 214535 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | || || |||| || || || | || ||| | | |||| | Sbjct 214536 GGACTGCTGAGGAAATCGACTTGGGTAAAGATACTCATGACTGGAACAACAAGTTGAACG 214595 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | | || | ||| | || |||||||| ||||| || | ||| ||||| |||| Sbjct 214596 ATAACGAAAGGTTTTTTGTTTCCAGAATTTTGGCTTTCTTCGCTGCCTCTGATGGTATCG 214655 Query 125176 TCAACGACAATCTG-TTGACA-CGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 |||| || || || |||| | | |||| | | |||| | | || || | ||| Sbjct 214656 TCAATGAAAACTTGGTTGAAAACTTTTCTGCCGA-AGTTCAAG-TGCCTGAAGCCAAGTG 214713 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 || ||||| |||||||||||||| || ||| | ||||| |||| |||||| |||| Sbjct 214714 TTTCTACGGTTTCCAAATCATGATGGAAAACATCCACTCCGAAACCTACTCTTTGTTGAT 214773 Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCGACACG 125351 ||| ||||| |||| ||| | || | || | | || ||||| ||||| || Sbjct 214774 CGACTCATACATCAAGGATC--CAAAGGAAGCTGACTTCTTGTTCAACGCTATCGAAACC 214831 Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411 | || || | ||| ||| | |||| | | ||||| |||| || | || Sbjct 214832 ATTCCACAAATTAAGAGAAAAGCTGACTGGGCTTTGAGATGGATTAATGATAACGATGCT 214891 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471 | || || || ||| | || || ||||| ||||| || || || |||||| ||| | Sbjct 214892 TTGTTCGGTGAAAGATTAGTCGCTTTCGCTGCCGTTGAAGGTATTTTCTTTAGTGGTTCT 214951 Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531 ||||| | || || ||| | ||||| | || | ||||| || |||| | || Sbjct 214952 TTTGCTTCTATTTTCTGGTTGAAGAAAAGAGGTTTAATGCCAGGTTTGACTTTCTCCAAT 215011 Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAAC 125591 || || || | ||||||| || | || |||||||| ||| || ||| | | Sbjct 215012 GAATTGATTTGCAGAGACGAAGGTTTGCATACAGACTTTGCATGTCT-CTTATTCTC--C 215068 Query 125592 TATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTC-ATCAACATTGTAACCGATGC 125650 || ||| | || |||| ||| |||| ||| | ||| || | || || || Sbjct 215069 CATTTGCAAAAC-AGACCAGACCCA-----GAAATCGTCGAACAA-ATCATCACTGAAGC 215121 Query 125651 CGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAA 125710 || || ||| | || | | || || | | || |||| || | || ||||| Sbjct 215122 TGTTGCTATTGAAAAGGAATACTTCACTGATGCTTTGCCAATCAGTTTGTTGGGTATGAA 215181 Query 125711 CTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGAT 125770 ||| ||| | ||||| | ||| | |||||||| || ||| | || | ||||| | Sbjct 215182 CTGTAAGTTGATGTGTCAATACGTGGAGTTTGTCGCTGATAGATTATT-----AGTTGCT 215236 Query 125771 -----TGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA 125825 | | ||| ||||||| |||| || ||||| || |||||| | ||| || Sbjct 215237 CTAGGTAACGAGAAGGTTTACAATGCCACCAACCCCTTCGACTTCATGGAAAACATCTCC 215296 Query 125826 CTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTACAAA 125873 | | ||||||||||| || || || |||| || || || ||| || Sbjct 215297 TTGGCCGGTAAGACCAATTTCTTTGAAAAGAGAGTTAGTGATTACCAA 215344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057430721160