Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq180 123 2e-23 >seq180 Length=546618 Score = 123 bits (136), Expect = 2e-23 Identities = 170/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 19971 TTTATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGT 20030 || |||| | ||| |||| || ||||| ||||| || || |||||||| ||||| |||| Sbjct 253073 TTGATCAGTGTCCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGT 253014 Query 20031 TGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTT 20090 ||||||| ||| |||| || |||||||||||| || || || | || | || || | Sbjct 253013 TGTAATCAGCCAAAGTTCTACCATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCT 252954 Query 20091 GATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGC 20150 | || || | ||||| ||||| ||| || ||| || | | ||| | ||| Sbjct 252953 GGTCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGG 252894 Query 20151 CAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || ||| ||||| || ||||| || |||||||| || ||||| ||||||||||| Sbjct 252893 AAGATTCAACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| ||||| || || || ||||| ||||| ||||||||||| || Sbjct 252834 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252775 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || ||||||||||| || || || | || | || ||||| || || Sbjct 252774 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252715 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| ||| || ||| || | | ||| | ||| || ||| | Sbjct 252714 ATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACT 252655 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || ||||| || |||||||| || ||||| ||||||||||| Sbjct 252654 TCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| ||||| || || || ||||| ||||| ||||||||||| || Sbjct 252606 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252547 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || ||||||||||| || || || | || | || ||||| || || Sbjct 252546 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252487 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| ||| || ||| || | | ||| | ||| || ||| | Sbjct 252486 ATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACT 252427 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 |||| || ||||| || || ||||| ||||| || |||||||||||| Sbjct 252426 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATT 252379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419586223279671