Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq103 163 2e-35 >seq103 Length=1665694 Score = 163 bits (180), Expect = 2e-35 Identities = 544/844 (64%), Gaps = 13/844 (2%) Strand=Plus/Minus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || || |||||||| |||||||| || || || || || | || || || ||| Sbjct 215346 TTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTT 215287 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAAC 12979 ||||| || ||||| || || | | | || || | |||| | | ||| Sbjct 215286 TCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGTTACCTAGAGCAACTAAT 215227 Query 12980 AATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 13039 ||||| ||||| |||||||| | ||| || ||| || | ||||||||| || | || Sbjct 215226 AATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAACAAA 215167 Query 13040 TTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATG 13099 | | |||| ||| || || || | | ||||| ||| |||| ||||| | | || Sbjct 215166 CTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGATGAT- 215108 Query 13100 TCTCTTATT--ACGTTCTCTAA---TGGAGGATTTGATAGATGCTTAAACATCATACATG 13154 || || ||| | ||| ||| ||| | ||| || | | ||||| Sbjct 215107 ----TTGTTCGACGATTTCTGGGTCTGGTCTGTTTTGCAAATGGGAGAATAAGAGACATG 215052 Query 13155 CAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCG 13214 |||| || ||||| ||||| ||||| | || | || || || || || | ||| | Sbjct 215051 CAAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACCTG 214992 Query 13215 GCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTC 13274 |||| | |||| ||| || | ||| || |||| |||||| ||||| ||| || || | Sbjct 214991 GCATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAATAC 214932 Query 13275 CTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCC 13334 ||||||| || || || || | || |||||||| || | || ||| | |||| Sbjct 214931 CTTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTATCATTAATCC 214872 Query 13335 ACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATA 13394 | | ||||||| |||||| |||| || |||| || ||||| || | Sbjct 214871 ATCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAGCGTTGAACA 214812 Query 13395 AATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTG 13454 | | | |||||| || || || | || ||||| || || |||| | Sbjct 214811 AGAAGTCAGCTTCCTTTGGATCCTTGATGTATGAGTCGATCAACAAAGAGTAGGTTTCGG 214752 Query 13455 AATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAA 13514 | || || ||||||||| ||||||||||| || ||||| | || || | || |||| Sbjct 214751 AGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCAGGCACTTGAA 214692 Query 13515 CTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaa 13574 |||||| |||| |||| | |||||||| || || || || ||| ||||| || | Sbjct 214691 CTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAGAGGCAGCGAAGA 214632 Query 13575 aaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTTAA---CCAATCTG 13631 |||| | || || ||| ||||||| || |||||| ||| || Sbjct 214631 AAGCCAAAATTCTGGAAACAAAAAACCTTTCGTTATCGTTCAACTTGTTGTTCCAGTCAT 214572 Query 13632 GAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTAT 13691 || |||||| || || | |||||| | ||||||||||| || ||||||| || | Sbjct 214571 GAGTATCTTTACCCAAGTCGATTTCCTCAGCAGTCCAAAAAGAGGCTTCAGCCTTTTTGT 214512 Query 13692 ACAT 13695 |||| Sbjct 214511 ACAT 214508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981396753782