Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq103 178 3e-39
seq180 129 1e-24
seq158 120 7e-22
>seq103
Length=1665694
Score = 178 bits (196), Expect = 3e-39
Identities = 410/607 (68%), Gaps = 22/607 (4%)
Strand=Plus/Plus
Query 268700 AGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTT 268759
||||| || | || ||||| || | ||| || ||| ||||||||| |||| |
Sbjct 214466 AGATTCGTCTTGTTCCCAATCAAGTACCATGAGATTTGGCAAATGTACAAAAAGGCTGAA 214525
Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACT-TAATAGATTGGAAAAA 268818
|| ||||||||||||| || ||| | || || | | || | || || ||||| ||
Sbjct 214526 GCCTCTTTTTGGACTGCTGAGGAAATCGACTTGGGTAAAGATACTCAT-GACTGGAACAA 214584
Query 268819 TT--TAAAACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAG 268875
| ||| | || ||||| ||| | || ||| | || || || || |
Sbjct 214585 CAAGTTGAACGATAACGAAAGGTTTTTTGTTTCCAGAATTTTGGCTTTCTTCGCTGCCTC 214644
Query 268876 TGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGA 268935
|||||||||||| || ||||| | || || || || | | || || || | |||||
Sbjct 214645 TGATGGTATCGTCAATGAAAACTTGGTTGAAAACTTTTCTGCCGAAGTTCAAGTGCCTGA 214704
Query 268936 AGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAG 268995
||||| ||||| ||||| ||||| || || ||||| || || || || | |||
Sbjct 214705 AGCCAAGTGTTTCTACGGTTTCCAAATCATGATGGAAAACATCCACTCCGAAACCTACTC 214764
Query 268996 TCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAA-GACTATTTTCTTC-- 269052
| | || || || | || || | ||| | ||| ||| |||| | || |||
Sbjct 214765 TTTGTTGATCGACTCATACATCAAGGAT-----CCAAAGGAAGCTGACT-TCTTGTTCAA 214818
Query 269053 ---TATGAGAACTATGG-ACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAA 269108
||| ||| || || | ||| |||| |||| |||||| ||| |||||| |
Sbjct 214819 CGCTATCGAAACCATTCCACAAATTAAGAGAAAAG-CTGACTGGGCTTTGAGATGGATTA 214877
Query 269109 ACGATAGCGCGCCTTA---CGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATAT 269165
| |||| || ||| ||| ||||| ||||| ||||| || || || |||||||| |
Sbjct 214878 ATGATAACGATGCTTTGTTCGGTGAAAGATTAGTCGCTTTCGCTGCCGTTGAAGGTATTT 214937
Query 269166 TCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGAT 269225
||||| || |||||||| |||| || ||||||||||||||||| | |||||||| |
Sbjct 214938 TCTTTAGTGGTTCTTTTGCTTCTATTTTCTGGTTGAAGAAAAGAGGTTTAATGCCAGGTT 214997
Query 269226 TAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTT 269285
| |||||||| || |||||||| |||| ||||||||||| || ||||| || |||
Sbjct 214998 TGACTTTCTCCAATGAATTGATTTGCAGAGACGAAGGTTTGCATACAGACTTTGCATGTC 215057
Query 269286 TATTATT 269292
| |||||
Sbjct 215058 TCTTATT 215064
>seq180
Length=546618
Score = 129 bits (142), Expect = 1e-24
Identities = 153/206 (74%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || ||||| || || |||| | ||||||||||||||| | ||| || ||
Sbjct 252576 GTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCGTCTTCCAATTGCTTACCG 252517
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | || ||||| || || || |||||||| || || |||||||| | |||
Sbjct 252516 GCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGGATTTG 252457
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| || ||| || || | || || ||||||||||| | |||
Sbjct 252456 ACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTT 252397
Query 104543 TTTACAAATATCTGCATTTTG-TGTA 104567
|| || || || |||||| || ||||
Sbjct 252396 TTAACGAAAATTTGCATTATGATGTA 252371
Score = 116 bits (128), Expect = 9e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || ||||| || || |||| | ||||||||||||||| | ||| || ||
Sbjct 252804 GTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCGTCTTCCAATTGCTTACCG 252745
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | || ||||| || || || |||||||| || || |||||||| | |||
Sbjct 252744 GCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGGATTTG 252685
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| || ||| || || | || || |||||||| || | ||
Sbjct 252684 ACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGTCTTACCGGTCAAGGTC 252625
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 252624 TTGACGAAAATTTGCAT 252608
>seq158
Length=604990
Score = 120 bits (132), Expect = 7e-22
Identities = 147/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || || || || ||||||| | |||||| || ||||| | ||| || |||
Sbjct 572327 GTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTTCCATCTTCCAATTGCTTACCA 572386
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| | || ||||| || || || |||||||| || || || ||||| | |||
Sbjct 572387 GCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGATTTG 572446
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| | || || || | ||||| ||||||||||| | ||
Sbjct 572447 ACATTATCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCAGTCAAGGTC 572506
Query 104543 TTTACAAATATCTGCATTTTG 104563
|| || || |||||||| |||
Sbjct 572507 TTAACGAAAATCTGCATCTTG 572527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151395582312228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |