Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq180 125 6e-24 seq158 104 2e-17 >seq180 Length=546618 Score = 125 bits (138), Expect = 6e-24 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| ||| |||||||| | ||| ||||||||||| | | Sbjct 252618 AAAATTTGCATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATG 252559 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || ||||| || ||| | || |||| || || ||| | ||||| |||||||| Sbjct 252558 TTGTAATCAGCCAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGT 252499 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || ||||| ||||| ||||| ||||| | ||| || | ||||| | | | ||||| Sbjct 252498 TGGTCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCG 252439 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | |||||||| || ||||| | |||||| || || || ||||| Sbjct 252438 GAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 252380 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 ||| |||||||||| ||| |||||||| | |||||||||||||| | ||| ||||| Sbjct 253063 TCCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGC 253004 Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899 || ||| | ||| |||| || || ||| | ||||| ||||||||||| ||||| || Sbjct 253003 CAAAGTTCTACCATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGG 252944 Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959 ||| ||||| ||||| | ||| || | ||||| | | | ||||| | || || Sbjct 252943 AATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252884 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || | || || || || || ||||| Sbjct 252883 TTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836 Score = 111 bits (122), Expect = 1e-19 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| ||| |||||||| | ||| ||||||||||| | | Sbjct 252846 AAAATTTGCATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATG 252787 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || ||||| || ||| | || |||| || || ||| | ||||| |||||||| Sbjct 252786 TTGTAATCAGCCAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGT 252727 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || ||||| ||||| ||||| ||||| | ||| || | ||||| | | | ||||| Sbjct 252726 TGGTCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCG 252667 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | |||||||| || || || | || || || || || ||||| Sbjct 252666 GAAGATTCAACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 >seq158 Length=604990 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||||||||||| | ||| ||||||||||| | ||| || || | Sbjct 572297 CCACCTCTCAATCTTAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCC 572356 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||| || || || | || || |||||||| || ||||| ||| Sbjct 572357 AAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGA 572416 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | || || | ||||| | | ||||| | | ||||| Sbjct 572417 ATTCCTTCCTTGTCTTGGATCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGACT 572476 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || ||||| || ||||| | || || || || |||||||| Sbjct 572477 TCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAAATCTGCAT 572523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290129704760